RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 DDR2Q16832 855 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 SDHAF4Q5VUM1 108 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 E4F1Q66K89 784 aaPredicted RBP20.58■□□□□ 0.89
HLA-A-209ENST00000638375 ELMSAN1Q6PJG2 1045 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 LCLAT1Q6UWP7 414 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 CLEC20AQ6ZU45 233 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 RTL10Q7L3V2 364 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 TMC6Q7Z403 805 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 SCN4BQ8IWT1 228 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 ZMIZ2Q8NF64 920 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 CPLX3Q8WVH0 158 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 ZNF606Q8WXB4 792 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 ZNF707Q96C28 371 aaPredicted RBP20.58■□□□□ 0.89
HLA-A-209ENST00000638375 MSLNLQ96KJ4 702 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 UBE2ZQ9H832 354 aaPredicted RBP20.58■□□□□ 0.89
HLA-A-209ENST00000638375 GRPEL1Q9HAV7 217 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 ZDHHC7Q9NXF8 308 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 CAPN11Q9UMQ6 739 aa20.58■□□□□ 0.89
HLA-A-209ENST00000638375 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.58■□□□□ 0.89
HLA-A-209ENST00000638375 REV3LO60673 3130 aa20.58■□□□□ 0.88
HLA-A-209ENST00000638375 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.57■□□□□ 0.88
HLA-A-209ENST00000638375 SPDYE4A6NLX3 237 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 F8VP50 259 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 CCL16O15467 120 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 THAP12O43422 761 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 MICAL2O94851 1124 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 ADCY5O95622 1261 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 LRG1P02750 347 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 CFHP08603 1231 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 HNRNPA1P09651 372 aaKnown RBP eCLIP20.57■□□□□ 0.88
HLA-A-209ENST00000638375 FAM200BP0CF97 657 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 CYP11B1P15538 503 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 HOXA9P31269 272 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 CASP14P31944 242 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 GRIK1P39086 918 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 RARS2Q5T160 578 aaKnown RBP20.57■□□□□ 0.88
HLA-A-209ENST00000638375 STKLD1Q8NE28 680 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 CMASQ8NFW8 434 aaPredicted RBP20.57■□□□□ 0.88
HLA-A-209ENST00000638375 KCNK16Q96T55 309 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 APOL5Q9BWW9 433 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 DUSP16Q9BY84 665 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 CSNK1G1Q9HCP0 422 aa20.57■□□□□ 0.88
HLA-A-209ENST00000638375 CCDC195A0A1B0GUA6 201 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 NPR3P17342 541 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 HOXB8P17481 243 aaPredicted RBP20.56■□□□□ 0.88
HLA-A-209ENST00000638375 ALDH1A3P47895 512 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 BPIFB4P59827 614 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 RPL10AP62906 217 aaKnown RBP20.56■□□□□ 0.88
HLA-A-209ENST00000638375 TBX2Q13207 712 aaPredicted RBP20.56■□□□□ 0.88
HLA-A-209ENST00000638375 PLD1Q13393 1074 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 TRIM14Q14142 442 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 STILQ15468 1287 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 PKDCCQ504Y2 493 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 TMC5Q6UXY8 1006 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 NOP9Q86U38 636 aaKnown RBP20.56■□□□□ 0.88
HLA-A-209ENST00000638375 ANKRD52Q8NB46 1076 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 GPR152Q8TDT2 470 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 EPS8L1Q8TE68 723 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 GIPC2Q8TF65 315 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 DDX1Q92499 740 aaKnown RBP20.56■□□□□ 0.88
HLA-A-209ENST00000638375 C8orf48Q96LL4 319 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 PRKD2Q9BZL6 878 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 S1PR5Q9H228 398 aa20.56■□□□□ 0.88
HLA-A-209ENST00000638375 DMAP1Q9NPF5 467 aaPredicted RBP20.56■□□□□ 0.88
HLA-A-209ENST00000638375 TRIM66O15016 1216 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 POU2F2P09086 479 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 FERP16591 822 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 PDE6CP51160 858 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 BCAT1P54687 386 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 MAP3K7CLP57077 242 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 ZBED6P86452 979 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 ARID5AQ03989 594 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 DENND1BQ6P3S1 775 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 IRF2BP2Q7Z5L9 587 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 UBA3Q8TBC4 463 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 SLC20A1Q8WUM9 679 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 HESX1Q9UBX0 185 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 CDH22Q9UJ99 828 aa20.55■□□□□ 0.88
HLA-A-209ENST00000638375 NOCTQ9UK39 431 aaKnown RBP20.55■□□□□ 0.88
HLA-A-209ENST00000638375 LUC7L2Q9Y383 392 aaKnown RBP20.55■□□□□ 0.88
HLA-A-209ENST00000638375 HHLA1C9JL84 531 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 H3BQ06 376 aaPredicted RBP20.54■□□□□ 0.88
HLA-A-209ENST00000638375 M0QYV0 167 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 TULP2O00295 520 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 MED7O43513 233 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 KCNA5P22460 613 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 ANXA13P27216 316 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 EPHB3P54753 998 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 PDE4CQ08493 712 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 GOLGA8FQ08AF8 430 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 GOLGA8DPQ0D2H9 430 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 MTMR3Q13615 1198 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 CLUL1Q15846 466 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 SFMBT2Q5VUG0 894 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 TAF3Q5VWG9 929 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 HLA-CQ95604 372 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 SPATA17Q96L03 361 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 PRDM6Q9NQX0 595 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 AIPL1Q9NZN9 384 aa20.54■□□□□ 0.88
HLA-A-209ENST00000638375 PCDHGC3Q9UN70 934 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms