RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 CNPY3Q9BT09 278 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 SENP6Q9GZR1 1112 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 PCDHB5Q9Y5E4 795 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 MRFAP1Q9Y605 127 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 TIAM2Q8IVF5 1701 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 BRD2P25440 801 aaKnown RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 ETFBP38117 255 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 ARL1P40616 181 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 HARS2P49590 506 aaKnown RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 GUCY2FP51841 1108 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 EPHB1P54762 984 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 TBX2Q13207 712 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 PDK1Q15118 436 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 CLEC16AQ2KHT3 1053 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 JADE1Q6IE81 842 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 C11orf63Q6NUN7 778 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 EMID1Q96A84 441 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 SMARCD1Q96GM5 515 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 MCEEQ96PE7 176 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 EMILIN2Q9BXX0 1053 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 FAM49BQ9NUQ9 324 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 UXTQ9UBK9 157 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 PCSK1NQ9UHG2 260 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 NOC2LQ9Y3T9 749 aaKnown RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 ALG6Q9Y672 507 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 TMEM150BA6NC51 233 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 PIGRP01833 764 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ASGR1P07306 291 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 EN2P19622 333 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 EDNRBP24530 442 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ARHGAP1Q07960 439 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 NME3Q13232 169 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 DRP2Q13474 957 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 THOC5Q13769 683 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 BTG3Q14201 252 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 CEP85LQ5SZL2 805 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 DCLRE1AQ6PJP8 1040 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 B4GALNT4Q76KP1 1039 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 PHLDB2Q86SQ0 1253 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ZNF557Q8N988 423 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 FAF2Q96CS3 445 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 HSFY1Q96LI6 401 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SEPT5Q99719 369 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 SP110Q9HB58 689 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CALCOCO1Q9P1Z2 691 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 DCTN4Q9UJW0 460 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ST3GAL5Q9UNP4 418 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SIK3Q9Y2K2 1263 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SF3B1O75533 1304 aaKnown RBP eCLIP5.78□□□□□ -1.483e-6■■■■■ 86.6
CHD2-227ENST00000637572 BCORQ6W2J9 1755 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 A0A087X0T9 212 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 TBKBP1A7MCY6 615 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 EBAG9O00559 213 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CES2O00748 559 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 WNT7AO00755 349 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 TGFB1I1O43294 461 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CREB3O43889 395 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ERBB2P04626 1255 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 FAM163BP0C2L3 166 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 FAM228BP0C875 321 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 COL6A1P12109 1028 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 HNRNPH3P31942 346 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 SLC11A2P49281 568 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 EPHB3P54753 998 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CBX1P83916 185 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ATP11AP98196 1134 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 PRKCZQ05513 592 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ADCY2Q08462 1091 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SNX1Q13596 522 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ECM1Q16610 540 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CYP4A22Q5TCH4 519 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 YAF2Q8IY57 180 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 TOP6BLQ8N6T0 577 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SLC30A5Q8TAD4 765 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 PYROXD1Q8WU10 500 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ZNF606Q8WXB4 792 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 MRPS31Q92665 395 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 C18orf25Q96B23 403 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 DEFB118Q96PH6 123 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 DMAP1Q9NPF5 467 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 DDX43Q9NXZ2 648 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 TRPM5Q9NZQ8 1165 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 BFARQ9NZS9 450 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 MAST2Q6P0Q8 1798 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 H0YGN5 161 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 DHX15O43143 795 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 PHF2O75151 1096 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CRCPO75575 148 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SGPL1O95470 568 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 INHAP05111 366 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 STIP1P31948 543 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 MSH2P43246 934 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 FNTAP49354 379 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 RGS7P49802 495 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CASP5P51878 434 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SPIRE1Q08AE8 756 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 C2orf54Q08AI8 447 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 MTF1Q14872 753 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CNGA2Q16280 664 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 KCNA10Q16322 511 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms