RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 JAMLQ86YT9 394 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 TSEN2Q8NCE0 465 aaKnown RBP22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 SLC2A14Q8TDB8 520 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 ZWILCHQ9H900 591 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 RSAD1Q9HA92 442 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 WDR35Q9P2L0 1181 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 HESX1Q9UBX0 185 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 MTUS1Q9ULD2 1270 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 GIT1Q9Y2X7 761 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 FRMPD3Q5JV73 1810 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 BHMG1C9JSJ3 638 aaPredicted RBP22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 I3L4J1 428 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 KRT10P13645 584 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 IL1R2P27930 398 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 PTGIRP43119 386 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 SMC1AQ14683 1233 aaKnown RBP22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 KCNT1Q5JUK3 1230 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 FAM26DQ5JW98 314 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 KAZNQ674X7 775 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 MRPL10Q7Z7H8 261 aaKnown RBP22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 NIPA2Q8N8Q9 360 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 SLC35F5Q8WV83 523 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 UBE2Q2Q8WVN8 375 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 PLVAPQ9BX97 442 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 MIS12Q9H081 205 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 SLC38A7Q9NVC3 462 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 A0A0U1RQF3 1178 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 YY1P25490 414 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 CHRNA3P32297 505 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 FLT3P36888 993 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 STILQ15468 1287 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 KIAA0319Q5VV43 1072 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 SCUBE3Q8IX30 993 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 HASPINQ8TF76 798 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 RAPGEF5Q92565 580 aa22.81■■□□□ 1.24
CHRNA7-228ENST00000637519 CLDN5O00501 218 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 COILP38432 576 aaPredicted RBP22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 SLC25A11Q02978 314 aaKnown RBP22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 CYP1B1Q16678 543 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 ARHGAP17Q68EM7 881 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 MFSD7Q6UXD7 560 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 CRYBG2Q8N1P7 616 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 TOP6BLQ8N6T0 577 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 EXD1Q8NHP7 514 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 CLEC4CQ8WTT0 213 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 SENP8Q96LD8 212 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 SLITRK1Q96PX8 696 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 OSBPL8Q9BZF1 889 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 UTP11Q9Y3A2 253 aaKnown RBP22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 WARSP23381 471 aaKnown RBP22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 C15orf59Q2T9L4 293 aaPredicted RBP22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 EMBQ6PCB8 327 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 OLFML1Q6UWY5 402 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 CCDC105Q8IYK2 499 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 B3GALNT2Q8NCR0 500 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 UNC93B1Q9H1C4 597 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 PCSK1NQ9UHG2 260 aa22.8■■□□□ 1.24
CHRNA7-228ENST00000637519 F8W810 466 aa22.79■■□□□ 1.24
CHRNA7-228ENST00000637519 PAPSS1O43252 624 aaPredicted RBP22.79■■□□□ 1.24
CHRNA7-228ENST00000637519 KLF1Q13351 362 aaPredicted RBP22.79■■□□□ 1.24
CHRNA7-228ENST00000637519 TSEN34Q9BSV6 310 aaKnown RBP22.79■■□□□ 1.24
CHRNA7-228ENST00000637519 ZNF623O75123 536 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 RAB27AP51159 221 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 FAM193AP78312 1265 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 DHX34Q14147 1143 aaKnown RBP22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 CDO1Q16878 200 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 RTN4RL1Q86UN2 441 aaPredicted RBP22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 CAVIN3Q969G5 261 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 SLC4A5Q9BY07 1137 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 PCYOX1Q9UHG3 505 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 LRRD1A4D1F6 860 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 OAS2P29728 719 aaKnown RBP22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 RABGGTBP53611 331 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 SLC43A3Q8NBI5 491 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 FNIP1Q8TF40 1166 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 RXFP2Q8WXD0 754 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 LINC01599Q8WXQ3 324 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 CFAP57Q96MR6 1250 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 ERP44Q9BS26 406 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 UBXN6Q9BZV1 441 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 DDX43Q9NXZ2 648 aaKnown RBP22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 SNX24Q9Y343 169 aa22.78■■□□□ 1.24
CHRNA7-228ENST00000637519 C2CD4BA6NLJ0 364 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 LCP1P13796 627 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 BCAT1P54687 386 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 BST2Q10589 180 aaKnown RBP22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 CUL1Q13616 776 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 PPP2R5EQ16537 467 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 UPP1Q16831 310 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 DUPD1Q68J44 220 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 ECHDC2Q86YB7 292 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 FUKQ8N0W3 1084 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 C12orf50Q8NA57 414 aaPredicted RBP22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 ANKRD52Q8NB46 1076 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 RIN2Q8WYP3 895 aaPredicted RBP22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 SEC14L1Q92503 715 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 TRAIPQ9BWF2 469 aa22.77■■□□□ 1.24
CHRNA7-228ENST00000637519 LRRC19Q9H756 370 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms