RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PTGIRP43119 386 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 BRCC3P46736 316 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 PDE6CP51160 858 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 ZNF132P52740 706 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 RABGGTBP53611 331 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 JAM2P57087 298 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 GSDMDP57764 484 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 PTK2Q05397 1052 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 GPM6BQ13491 265 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 PSMD5Q16401 504 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 CFAP221Q4G0U5 840 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 FAM171A1Q5VUB5 890 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 PHLDB3Q6NSJ2 640 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 DPY19L2P1Q6NXN4 242 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 C4orf50Q6ZRC1 276 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 TMCO2Q7Z6W1 182 aaPredicted RBP7.15□□□□□ -1.26
UPF3B-205ENST00000636792 DRC7Q8IY82 874 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 FAM71AQ8IYT1 594 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 SPPL3Q8TCT6 385 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 SPPL2BQ8TCT7 592 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 POF1BQ8WVV4 589 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 KBTBD7Q8WVZ9 684 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 MRPL38Q96DV4 380 aaKnown RBP7.15□□□□□ -1.26
UPF3B-205ENST00000636792 PCMTD1Q96MG8 357 aaPredicted RBP7.15□□□□□ -1.26
UPF3B-205ENST00000636792 C17orf80Q9BSJ5 609 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 CRACR2AQ9BSW2 395 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 GPR62Q9BZJ7 368 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 PNPLA8Q9NP80 782 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 UBE2TQ9NPD8 197 aaPredicted RBP7.15□□□□□ -1.26
UPF3B-205ENST00000636792 FAM207AQ9NSI2 230 aaPredicted RBP7.15□□□□□ -1.26
UPF3B-205ENST00000636792 CAPN11Q9UMQ6 739 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 LUC7L2Q9Y383 392 aaKnown RBP7.15□□□□□ -1.26
UPF3B-205ENST00000636792 BZW2Q9Y6E2 419 aaKnown RBP7.15□□□□□ -1.26
UPF3B-205ENST00000636792 PLXNA3P51805 1871 aa7.15□□□□□ -1.27
UPF3B-205ENST00000636792 GRXCR1A8MXD5 290 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 A8MXQ7 604 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 NT5C1B-RDH14C9J2C7 533 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 NCK2O43639 380 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 NRDCO43847 1150 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 NOL4O94818 638 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 PAPLNO95428 1278 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 GYPCP04921 128 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ITGB2P05107 769 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 SETSIPP0DME0 302 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 VDRP11473 427 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ACO1P21399 889 aaKnown RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 TKTP29401 623 aaKnown RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 HOXA9P31269 272 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 SOX5P35711 763 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 PRKCIP41743 596 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 MAGEA11P43364 429 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 POLR2FP61218 127 aaKnown RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 CDK17Q00537 523 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 GPR17Q13304 367 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 RAPGEF1Q13905 1077 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 RAB33AQ14088 237 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 DRAP1Q14919 205 aaPredicted RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 PTPN14Q15678 1187 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 CTXN3Q4LDR2 81 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 GREB1Q4ZG55 1949 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 RTP2Q5QGT7 225 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 KIAA0319Q5VV43 1072 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 WSCD1Q658N2 575 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ARHGAP17Q68EM7 881 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 IQCEQ6IPM2 695 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 VSTM1Q6UX27 236 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 CYP26C1Q6V0L0 522 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 TRIM72Q6ZMU5 477 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 TMC7Q7Z402 723 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 TMEM173Q86WV6 379 aaPredicted RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ARHGEF19Q8IW93 802 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 VPS52Q8N1B4 723 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 RBBP8NLQ8NC74 664 aaPredicted RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 B3GALNT2Q8NCR0 500 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 OR6B3Q8NGW1 331 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 LNX1Q8TBB1 728 aaPredicted RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 HASPINQ8TF76 798 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 BCL7CQ8WUZ0 217 aaPredicted RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ZNF837Q96EG3 531 aaPredicted RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 TMEM176AQ96HP8 235 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 KREMEN1Q96MU8 473 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 DNAJC7Q99615 494 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 TCF25Q9BQ70 676 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 SYT15Q9BQS2 421 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 PI4K2AQ9BTU6 479 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 RHOBTB2Q9BYZ6 727 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ZNF518BQ9C0D4 1074 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ELOVL4Q9GZR5 314 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 MIS12Q9H081 205 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ZCWPW1Q9H0M4 648 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ZNF576Q9H609 170 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 SMYD3Q9H7B4 428 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 CYLDQ9NQC7 956 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ENTPD7Q9NQZ7 604 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 DDX43Q9NXZ2 648 aaKnown RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 EHD2Q9NZN4 543 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 AIPL1Q9NZN9 384 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 AFF4Q9UHB7 1163 aaKnown RBP7.14□□□□□ -1.27
UPF3B-205ENST00000636792 DNAJC12Q9UKB3 198 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 CEP83Q9Y592 693 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms