RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 PHKG2P15735 406 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CHRM3P20309 590 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 AGFG1P52594 562 aaKnown RBP3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ZNF134P52741 427 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ARFIP2P53365 341 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 IGBP1P78318 339 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TFF2Q03403 129 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MCL1Q07820 350 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TTF1Q15361 905 aaPredicted RBP3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CERKLQ49MI3 558 aaPredicted RBP3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ANO6Q4KMQ2 910 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ARHGAP40Q5TG30 622 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DENND2CQ68D51 928 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ZNF783Q6ZMS7 281 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 NEK8Q86SG6 692 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 RAB11FIP4Q86YS3 637 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ABHD11Q8NFV4 315 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 OR6B3Q8NGW1 331 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PIGOQ8TEQ8 1089 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ATG4AQ8WYN0 398 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MRGPRX1Q96LB2 322 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TRIM54Q9BYV2 358 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 RHOBTB2Q9BYZ6 727 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CDH19Q9H159 772 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TRIM36Q9NQ86 728 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ZSCAN32Q9NX65 697 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SERGEFQ9UGK8 458 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 IP6K2Q9UHH9 426 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 NDRG4Q9ULP0 352 aaKnown RBP3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 UBE2Q2LH0YL09 131 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ZNF213O14771 459 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PHGDHO43175 533 aaKnown RBP3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MYCLP12524 364 aaPredicted RBP3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 JUPP14923 745 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PHKA1P46020 1223 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SLC11A2P49281 568 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 LILRA4P59901 499 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 HOXA4Q00056 320 aaPredicted RBP3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 EIF2B5Q13144 721 aaKnown RBP3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 RAB32Q13637 225 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 BOP1Q14137 746 aaKnown RBP3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TREML2Q5T2D2 321 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 RGS7BPQ6MZT1 257 aaPredicted RBP3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TRIM72Q6ZMU5 477 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MAVSQ7Z434 540 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DAAM2Q86T65 1068 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SLC15A3Q8IY34 581 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 LRRC71Q8N4P6 559 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DAZAP1Q96EP5 407 aaKnown RBP3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TMEM79Q9BSE2 394 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TTYH3Q9C0H2 523 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ZCWPW1Q9H0M4 648 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DDX56Q9NY93 547 aaKnown RBP3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DKK3Q9UBP4 350 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GABBR1Q9UBS5 961 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ADAMTS5Q9UNA0 930 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ST3GAL5Q9UNP4 418 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SSX2IPQ9Y2D8 614 aa3.6□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 A0A1W2PPL8 197 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 A1L4Q6 167 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MBD3L4A6NDZ8 208 aaPredicted RBP3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MBD3L3A6NE82 208 aaPredicted RBP3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 BTBD19C9JJ37 291 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 FAM227AF5H4B4 570 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 POC1B-GALNT4F8VUJ3 575 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PPP6CO00743 305 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ADAMTS3O15072 1205 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CCP110O43303 1012 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 UBXN7O94888 489 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ALDH2P05091 517 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 HDCP19113 662 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 EN2P19622 333 aaPredicted RBP3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 HTR1BP28222 390 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 EPHB2P29323 1055 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CCKBRP32239 447 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CYP2C18P33260 490 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 LIPAP38571 399 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DGKEP52429 567 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MYO1EQ12965 1108 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 LAMB3Q13751 1172 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PCID2Q5JVF3 399 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CERCAMQ5T4B2 595 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PRAMEF17Q5VTA0 474 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 Q6ZWC4 215 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SFTPA1Q8IWL2 248 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GRAMD1CQ8IYS0 662 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GALNT16Q8N428 558 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GALNT4Q8N4A0 578 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 VGLL2Q8N8G2 317 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SLC35G2Q8TBE7 412 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 OSCP1Q8WVF1 389 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 RPL36ALQ969Q0 106 aaKnown RBP3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GPATCH3Q96I76 525 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SNX18Q96RF0 628 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 THAP7Q9BT49 309 aaPredicted RBP3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TMEM60Q9H2L4 133 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 XPNPEP3Q9NQH7 507 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MRPS18AQ9NVS2 196 aaKnown RBP3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SH3BP4Q9P0V3 963 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms