RNA–Protein interactions for RNA: ENST00000631289.1

CHRNA4-214, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-214ENST00000631289 EIF3DO15371 548 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 RNF40O75150 1001 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 EGFP01133 1207 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 GJA4P35212 333 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 PDE6CP51160 858 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 GALK1P51570 392 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 PSMC1P62191 440 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 NR1H3Q13133 447 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 KCNB1Q14721 858 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 ZNF77Q15935 545 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 FBXO43Q4G163 708 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 PKN3Q6P5Z2 889 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 VSTM1Q6UX27 236 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 WDR49Q8IV35 697 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 GLIS3Q8NEA6 775 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 RIN3Q8TB24 985 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 GAB3Q8WWW8 586 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 ATP2A3Q93084 1043 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 HPS3Q969F9 1004 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 MYLPFQ96A32 169 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 CYP2S1Q96SQ9 504 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 MMS19Q96T76 1030 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 TRIM9Q9C026 710 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 KBTBD4Q9NVX7 518 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 PTPRJQ12913 1337 aa22.29■■□□□ 1.16
CHRNA4-214ENST00000631289 SLC30A4O14863 429 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 PPP6R2O75170 966 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 ATP2C2O75185 946 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 RPP40O75818 363 aaKnown RBP22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 CCDC192P0DO97 292 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 ANXA13P27216 316 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 GRIK1P39086 918 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 PXNP49023 591 aaPredicted RBP22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 USP4Q13107 963 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 CACNA2D4Q7Z3S7 1137 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 ARL14EPQ8N8R7 260 aaPredicted RBP22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 IQUBQ8NA54 791 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 KBTBD7Q8WVZ9 684 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 DHX58Q96C10 678 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 CHFRQ96EP1 664 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 CEP295NLQ96MC4 621 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 FNBP1Q96RU3 617 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 SLC22A12Q96S37 553 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 EHD2Q9NZN4 543 aa22.28■■□□□ 1.16
CHRNA4-214ENST00000631289 PDGFRBP09619 1106 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 HDCP19113 662 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 TNNI1P19237 187 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 WARSP23381 471 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 BDNFP23560 247 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 LMO2P25791 158 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 HOXC13P31276 330 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 CYP27A1Q02318 531 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 E2F4Q16254 413 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 FAM26FQ5R3K3 315 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 TRAPPC11Q7Z392 1133 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 LIMS2Q7Z4I7 341 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 CAMKK1Q8N5S9 505 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 RDH13Q8NBN7 331 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 ZNF507Q8TCN5 953 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 CD101Q93033 1021 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 LOXL4Q96JB6 756 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 SPATA17Q96L03 361 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 SNX25Q9H3E2 840 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 CRTAC1Q9NQ79 661 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 TRPM5Q9NZQ8 1165 aa22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 TFIP11Q9UBB9 837 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 HELZP42694 1942 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-214ENST00000631289 PTPRDP23468 1912 aa22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 AXIN1O15169 862 aa22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 CUTAO60888 179 aa22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 DLATP10515 647 aaKnown RBP22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 SNRNP35Q16560 246 aaKnown RBP22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 DENND5BQ6ZUT9 1274 aa22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 SH3RF2Q8TEC5 729 aa22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 FBRSL1Q9HCM7 1045 aaKnown RBP22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 GCNT4Q9P109 453 aa22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 WNT6Q9Y6F9 365 aa22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 UBE4BO95155 1302 aa22.26■■□□□ 1.15
CHRNA4-214ENST00000631289 TPRP12270 2363 aaKnown RBP22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 C2orf78A6NCI8 922 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 TRIM66O15016 1216 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 AKAP3O75969 853 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 YEATS4O95619 227 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 PFKLP17858 780 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 HOXD13P35453 343 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 GNL1P36915 607 aaPredicted RBP22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 CYP2J2P51589 502 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 PSMD2Q13200 908 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 EML3Q32P44 896 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 EPM2AIP1Q7L775 607 aaPredicted RBP22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 HS2ST1Q7LGA3 356 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 CCDC26Q8TAB7 109 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 ACDQ96AP0 544 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 CGRRF1Q99675 332 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 MAGEF1Q9HAY2 307 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 AGPAT3Q9NRZ7 376 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 ARHGAP26Q9UNA1 814 aa22.25■■□□□ 1.15
CHRNA4-214ENST00000631289 NFATC1O95644 943 aa22.24■■□□□ 1.15
CHRNA4-214ENST00000631289 TCF3P15923 654 aa22.24■■□□□ 1.15
CHRNA4-214ENST00000631289 SNRPFP62306 86 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms