RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 PRKAA2P54646 552 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 RAB1AP62820 205 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 TRA2BP62995 288 aaKnown RBP5.17□□□□□ -1.58
SDCBP-213ENST00000630925 IRX1P78414 480 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-213ENST00000630925 HTRA4P83105 476 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-213ENST00000630925 GRSF1Q12849 480 aaKnown RBP eCLIP5.17□□□□□ -1.58
SDCBP-213ENST00000630925 RALGDSQ12967 914 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 RIPK1Q13546 671 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 TYSND1Q2T9J0 566 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 BBS9Q3SYG4 887 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 CFAP221Q4G0U5 840 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 GARNL3Q5VVW2 1013 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 CAPRIN2Q6IMN6 1127 aaKnown RBP5.17□□□□□ -1.58
SDCBP-213ENST00000630925 CENPPQ6IPU0 288 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 KLC3Q6P597 504 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 PTCHD4Q6ZW05 846 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 H1FNTQ75WM6 255 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-213ENST00000630925 FAM9CQ8IZT9 166 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 TXLNBQ8N3L3 684 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 BVESQ8NE79 360 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 TRIM58Q8NG06 486 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 METTL21AQ8WXB1 218 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 CNKSR1Q969H4 720 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 ADAD1Q96M93 576 aaKnown RBP5.17□□□□□ -1.58
SDCBP-213ENST00000630925 HHIPQ96QV1 700 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 DDX50Q9BQ39 737 aaKnown RBP5.17□□□□□ -1.58
SDCBP-213ENST00000630925 RIOK1Q9BRS2 568 aaKnown RBP5.17□□□□□ -1.58
SDCBP-213ENST00000630925 UQCC2Q9BRT2 126 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 STRA6Q9BX79 667 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 SELENONQ9NZV5 590 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 ANAPC5Q9UJX4 755 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 TBX20Q9UMR3 447 aa5.17□□□□□ -1.58
SDCBP-213ENST00000630925 ITSN2Q9NZM3 1697 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 PRR5-ARHGAP8B1AHC4 643 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 PTGES3LE9PB15 166 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 GFRA2O00451 464 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 XYLBO75191 536 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 PPM1BO75688 479 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 S100A9P06702 114 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 TPOP07202 933 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ITGA5P08648 1049 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 HMOX1P09601 288 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 DLATP10515 647 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ACPPP15309 386 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ZNF3P17036 446 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 NME2P22392 152 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 EDNRBP24530 442 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 IL12RB1P42701 662 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 NT5C2P49902 561 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ZNF157P51786 506 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CCNHP51946 323 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 GBX2P52951 348 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 PTPN5P54829 565 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ZNF445P59923 1031 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 MRPS5P82675 430 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 FMO1Q01740 532 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 TRIM32Q13049 653 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 AAK1Q2M2I8 961 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 AKNAD1Q5T1N1 836 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 SHEQ5VZ18 495 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 TDRD10Q5VZ19 366 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 OGFOD3Q6PK18 319 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 SLC30A9Q6PML9 568 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 MPRIPQ6WCQ1 1025 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ARMC8Q8IUR7 673 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CCDC83Q8IWF9 413 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 TUSC5Q8IXB3 177 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 KIAA2013Q8IYS2 634 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 LILRB4Q8NHJ6 448 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 IL31RAQ8NI17 732 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 FAM76AQ8TAV0 307 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 TBC1D5Q92609 795 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CUL5Q93034 780 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 RAB7BQ96AH8 199 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ZNF653Q96CK0 615 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CYFIP2Q96F07 1278 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 HSH2DQ96JZ2 352 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 MSLNLQ96KJ4 702 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ATP6V1G3Q96LB4 118 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 AGAP2Q99490 1192 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 PACSIN1Q9BY11 444 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 NYXQ9GZU5 481 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 C8orf33Q9H7E9 229 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 GDAP2Q9NXN4 497 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 PSME2Q9UL46 239 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CNOT6Q9ULM6 557 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 KLHL20Q9Y2M5 609 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 DIP2AQ14689 1571 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 KDM5DQ9BY66 1539 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 LRRC9Q6ZRR7 1453 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 MYO1FO00160 1098 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 SERPINC1P01008 464 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 TP53P04637 393 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CLEC3BP05452 202 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 TRIM21P19474 475 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 TPP2P29144 1249 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ARL3P36405 182 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 KCNC1P48547 511 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CAMLGP49069 296 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 DLG4P78352 724 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms