RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 CACNA2D1P54289 1103 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 NRLP54845 237 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 USP46P62068 366 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 MYO1EQ12965 1108 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 CUL4BQ13620 913 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 RUNX3Q13761 415 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 ZNF268Q14587 947 aaPredicted RBP17.73■□□□□ 0.43
PDCD6-214ENST00000628729 PSMD6Q15008 389 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 DUOXA2Q1HG44 320 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 BMT2Q1RMZ1 405 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 RSPO4Q2I0M5 234 aaPredicted RBP17.73■□□□□ 0.43
PDCD6-214ENST00000628729 TMEM196Q5HYL7 178 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 RESP18Q5W5W9 173 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 HEATR6Q6AI08 1181 aaKnown RBP17.73■□□□□ 0.43
PDCD6-214ENST00000628729 DPH6Q7L8W6 267 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 ZNF516Q92618 1163 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 EZH1Q92800 747 aaPredicted RBP17.73■□□□□ 0.43
PDCD6-214ENST00000628729 PCED1BQ96HM7 432 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 LRRC27Q9C0I9 530 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 TRPC7Q9HCX4 862 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 THG1LQ9NWX6 298 aaKnown RBP17.73■□□□□ 0.43
PDCD6-214ENST00000628729 GCNT4Q9P109 453 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 UXTQ9UBK9 157 aaPredicted RBP17.73■□□□□ 0.43
PDCD6-214ENST00000628729 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.72■□□□□ 0.43
PDCD6-214ENST00000628729 BDNFP23560 247 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 ZXDBP98169 803 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 PPP2R5DQ14738 602 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 MTF1Q14872 753 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 DGLUCYQ7Z3D6 616 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 CCDC127Q96BQ5 260 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 CHAMP1Q96JM3 812 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 XYLT2Q9H1B5 865 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 DPEP3Q9H4B8 488 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 KIAA1586Q9HCI6 787 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 SLC39A2Q9NP94 309 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 CDH9Q9ULB4 789 aa17.72■□□□□ 0.43
PDCD6-214ENST00000628729 SOBPA7XYQ1 873 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 EGFP01133 1207 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 PDGFRBP09619 1106 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 AFMP43652 599 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 CASP4P49662 377 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 AMPD3Q01432 767 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 FAM160A1Q05DH4 1040 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 PUM1Q14671 1186 aaKnown RBP eCLIP17.71■□□□□ 0.43
PDCD6-214ENST00000628729 SURF1Q15526 300 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 PRR23BQ6ZRT6 265 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 ARL14EPQ8N8R7 260 aaPredicted RBP17.71■□□□□ 0.43
PDCD6-214ENST00000628729 XXYLT1Q8NBI6 393 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 ELMO3Q96BJ8 720 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 MAGEF1Q9HAY2 307 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 WNT6Q9Y6F9 365 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 LAMA1P25391 3075 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 ATG2BQ96BY7 2078 aa17.71■□□□□ 0.43
PDCD6-214ENST00000628729 TRDMT1O14717 391 aaKnown RBP17.7■□□□□ 0.42
PDCD6-214ENST00000628729 ACTN4O43707 911 aaKnown RBP17.7■□□□□ 0.42
PDCD6-214ENST00000628729 KLRC4O43908 158 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 CKMP06732 381 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 DNM1Q05193 864 aaKnown RBP17.7■□□□□ 0.42
PDCD6-214ENST00000628729 SPEM2Q0P670 501 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 MDH1BQ5I0G3 518 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 LAIR1Q6GTX8 287 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 C4orf50Q6ZRC1 276 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 LONP2Q86WA8 852 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 C12orf56Q8IXR9 622 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 SYNPOQ8N3V7 929 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 KIAA0895Q8NCT3 520 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 SPATA17Q96L03 361 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 MMS19Q96T76 1030 aa17.7■□□□□ 0.42
PDCD6-214ENST00000628729 TRAV19A0A0A6YYK7 116 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 RNF40O75150 1001 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 TACC1O75410 805 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 TNNI1P19237 187 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 HOXA6P31267 233 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 GJA4P35212 333 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 ME1P48163 572 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 PXNP49023 591 aaPredicted RBP17.69■□□□□ 0.42
PDCD6-214ENST00000628729 MYL6P60660 151 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 CYP27A1Q02318 531 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 SIM2Q14190 667 aaPredicted RBP17.69■□□□□ 0.42
PDCD6-214ENST00000628729 EML3Q32P44 896 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 VSTM1Q6UX27 236 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 HSCBQ8IWL3 235 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 TTC16Q8NEE8 873 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 MYCBPAPQ8TBZ2 947 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 OSCP1Q8WVF1 389 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 TTLL2Q9BWV7 592 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 ECT2Q9H8V3 914 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 MAGEC2Q9UBF1 373 aaPredicted RBP17.69■□□□□ 0.42
PDCD6-214ENST00000628729 SERTAD1Q9UHV2 236 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 GMEB2Q9UKD1 530 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 USP18Q9UMW8 372 aa17.69■□□□□ 0.42
PDCD6-214ENST00000628729 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.69■□□□□ 0.42
PDCD6-214ENST00000628729 ANTXRLA6NF34 631 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 F8VP50 259 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 CLDN5O00501 218 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 USP17L7P0C7H9 530 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 STK4Q13043 487 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 PDGFRLQ15198 375 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 GAB4Q2WGN9 574 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 WDR72Q3MJ13 1102 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms