RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 TMEM108Q6UXF1 575 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 FMNL3Q8IVF7 1028 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 DENND1AQ8TEH3 1009 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 PGBD1Q96JS3 809 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 TMEM60Q9H2L4 133 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 WWOXQ9NZC7 414 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 DDX20Q9UHI6 824 aaKnown RBP4.16□□□□□ -1.74
VBP1-204ENST00000625964 MED16Q9Y2X0 877 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.16□□□□□ -1.74
VBP1-204ENST00000625964 CFAP69A5D8W1 941 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 MYO1CO00159 1063 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 PHGDHO43175 533 aaKnown RBP4.16□□□□□ -1.74
VBP1-204ENST00000625964 RHOP08100 348 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 ATXN1LP0C7T5 689 aaKnown RBP4.16□□□□□ -1.74
VBP1-204ENST00000625964 ATF3P18847 181 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 ZNF134P52741 427 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 POLGP54098 1239 aaPredicted RBP4.16□□□□□ -1.74
VBP1-204ENST00000625964 UCP3P55916 312 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 NXPH1P58417 271 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 LAMB3Q13751 1172 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 IQCB1Q15051 598 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 GFOD2Q3B7J2 385 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 TSTD2Q5T7W7 516 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 VPS53Q5VIR6 699 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 ZNF783Q6ZMS7 281 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 MAEAQ7L5Y9 396 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 TECPR1Q7Z6L1 1165 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 C14orf80Q86SX3 495 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 PEG10Q86TG7 708 aaKnown RBP4.16□□□□□ -1.74
VBP1-204ENST00000625964 OR6B3Q8NGW1 331 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 MOGAT1Q96PD6 335 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 OSBPL9Q96SU4 736 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 TRIM54Q9BYV2 358 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.16□□□□□ -1.74
VBP1-204ENST00000625964 XPR1Q9UBH6 696 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 TMX2Q9Y320 296 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 LRP12Q9Y561 859 aa4.16□□□□□ -1.74
VBP1-204ENST00000625964 A6NNZ2 444 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 ADM5C9JUS6 153 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 DCLK1O15075 740 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 SNHG28P0DPA3 235 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 SLC7A1P30825 629 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 PXNP49023 591 aaPredicted RBP4.15□□□□□ -1.75
VBP1-204ENST00000625964 SLC11A2P49281 568 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 MAPK10P53779 464 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 LOXL3P58215 753 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 LILRA4P59901 499 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 CNN3Q15417 329 aaKnown RBP4.15□□□□□ -1.75
VBP1-204ENST00000625964 TXNRD1Q16881 649 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 LMBRD2Q68DH5 695 aaPredicted RBP4.15□□□□□ -1.75
VBP1-204ENST00000625964 AWAT2Q6E213 333 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 SWSAP1Q6NVH7 229 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 CCDC149Q6ZUS6 474 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 KIAA0319LQ8IZA0 1049 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 MPP5Q8N3R9 675 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 SLC15A4Q8N697 577 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 IL31RAQ8NI17 732 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 KBTBD7Q8WVZ9 684 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 FKBP10Q96AY3 582 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 FAM136AQ96C01 138 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 ATP6V0A4Q9HBG4 840 aa4.15□□□□□ -1.75
VBP1-204ENST00000625964 FRMPD2Q68DX3 1309 aaPredicted RBP4.14□□□□□ -1.75
VBP1-204ENST00000625964 BTN3A1O00481 513 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 THP07101 528 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 PDHA1P08559 390 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 VIPR2P41587 438 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 SATB1Q01826 763 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 GRM3Q14832 879 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 PTPRRQ15256 657 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 SUMO4Q6EEV6 95 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 APOA5Q6Q788 366 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 SAMD14Q8IZD0 417 aaPredicted RBP4.14□□□□□ -1.75
VBP1-204ENST00000625964 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.14□□□□□ -1.75
VBP1-204ENST00000625964 DNAJC5GQ8N7S2 189 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 TTC8Q8TAM2 541 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 AMBRA1Q9C0C7 1298 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 L1RE1Q9UN81 338 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 SHOC2Q9UQ13 582 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 ADGRA2Q96PE1 1338 aa4.14□□□□□ -1.75
VBP1-204ENST00000625964 VWC2LB2RUY7 222 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 GCOM1H8Y6P7 765 aaPredicted RBP4.13□□□□□ -1.75
VBP1-204ENST00000625964 PPM1DO15297 605 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 TBC1D4O60343 1298 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 CERS1P27544 350 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 ARFIP2P53365 341 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 CACNB3P54284 484 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 SLC13A2Q13183 592 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 TBCCQ15814 346 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 ARHGAP40Q5TG30 622 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 ICE2Q659A1 982 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 SFRP4Q6FHJ7 346 aaPredicted RBP4.13□□□□□ -1.75
VBP1-204ENST00000625964 NEK8Q86SG6 692 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 ZDHHC17Q8IUH5 632 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 FAM156AQ8NDB6 213 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 PUS7Q96PZ0 661 aaKnown RBP4.13□□□□□ -1.75
VBP1-204ENST00000625964 NELL2Q99435 816 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 PTDSS2Q9BVG9 487 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 C22orf23Q9BZE7 217 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 KLC4Q9NSK0 619 aa4.13□□□□□ -1.75
VBP1-204ENST00000625964 SERTAD3Q9UJW9 196 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms