RNA–Protein interactions for RNA: ENST00000623539.1

AP000648.3-201, humanhuman

BASIC

Gene AP000648.3, Length 4,507 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000648.3-201ENST00000623539 PUM3Q15397 648 aaKnown RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 MCMDC2Q4G0Z9 681 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 TEX35Q5T0J7 233 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 JAKMIP3Q5VZ66 844 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 NAA16Q6N069 864 aaPredicted RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 VWA1Q6PCB0 445 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 PPP1R32Q7Z5V6 425 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CROCCP2Q86T23 111 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 VPS36Q86VN1 386 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CCAR1Q8IX12 1150 aaKnown RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CCDC150Q8NCX0 1101 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 ZNF397Q8NF99 534 aaPredicted RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CAGE1Q8TC20 777 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 SSH3Q8TE77 659 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 GAB3Q8WWW8 586 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 SUCLG2Q96I99 432 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CDK5RAP3Q96JB5 506 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CCDC43Q96MW1 224 aaKnown RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 TSG101Q99816 390 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 LGR4Q9BXB1 951 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CUEDC2Q9H467 287 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 RNPEPQ9H4A4 650 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 TTC12Q9H892 705 aaPredicted RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CGNQ9P2M7 1197 aaKnown RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 PTPN22Q9Y2R2 807 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 USP42Q9H9J4 1324 aaKnown RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CEMIPQ8WUJ3 1361 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 HMGB1P1B2RPK0 211 aaPredicted RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 ZNF213O14771 459 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 PRKD3O94806 890 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 ERLIN2O94905 339 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 POMCP01189 267 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 VIPR2P41587 438 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 TRAPPC10P48553 1259 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 SLC16A1P53985 500 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 UBE2HP62256 183 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CETN1Q12798 172 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 CLCA4Q14CN2 919 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 STK38Q15208 465 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 ATP2B3Q16720 1220 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 KLHL40Q2TBA0 621 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 ZNF790Q6PG37 636 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 USP17L6PQ6QN14 398 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 GAREM2Q75VX8 874 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 SLC25A43Q8WUT9 341 aaPredicted RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 GCDHQ92947 438 aaPredicted RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 MOGAT1Q96PD6 335 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 KCNJ15Q99712 375 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 NPAS1Q99742 590 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 BDH2Q9BUT1 245 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 BTBD1Q9H0C5 482 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 TRPC5Q9UL62 973 aaPredicted RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 AKAP12Q02952 1782 aa1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 PHRF1Q9P1Y6 1649 aaKnown RBP1.75□□□□□ -2.13
AP000648.3-201ENST00000623539 EYA2O00167 538 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 ADAMTS3O15072 1205 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 RNF113AO15541 343 aaKnown RBP1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 ERLIN1O75477 346 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 GNA11P29992 359 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 TDO2P48775 406 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 RARRES1P49788 294 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 ARFIP2P53365 341 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 PDE1AP54750 535 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 BPIFB4P59827 614 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 MXRA7P84157 204 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 DUSP2Q05923 314 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 CD69Q07108 199 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 UBE4AQ14139 1066 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 BMS1Q14692 1282 aaKnown RBP1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 CEP85Q6P2H3 762 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 GAS2L3Q86XJ1 694 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 LPIN2Q92539 896 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 NEUROD6Q96NK8 337 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 UIMC1Q96RL1 719 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 EIF2AQ9BY44 585 aaKnown RBP1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 REXO4Q9GZR2 422 aaKnown RBP1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 NAPBQ9H115 298 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 ARPP21Q9UBL0 812 aaPredicted RBP1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 SWAP70Q9UH65 585 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 COL3A1P02461 1466 aaPredicted RBP1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 TOPAZ1Q8N9V7 1692 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 LMO7Q8WWI1 1683 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 A0A088AWK7 358 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 SHTN1A0MZ66 631 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 BICDL2A1A5D9 508 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 FAM86C2PA6NEL3 165 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 CCDC85CA6NKD9 419 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 ISM1B1AKI9 464 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 RBAK-RBAKDNI3L0D1 243 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 STX10O60499 249 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 PHKG2P15735 406 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 SDHBP21912 280 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 FDXRP22570 491 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 RECQLP46063 649 aaPredicted RBP1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 NEK4P51957 841 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 CACNA2D1P54289 1103 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 EPHB1P54762 984 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 SNX16P57768 344 aa1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 EIF4A1P60842 406 aaKnown RBP1.74□□□□□ -2.13
AP000648.3-201ENST00000623539 TNFAIP1Q13829 316 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms