RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 PIK3CGP48736 1102 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 MCM2P49736 904 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 RHBDL3P58872 404 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 NUCB1Q02818 461 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 CREMQ03060 361 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 PROSER3Q2NL68 480 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 CCDC93Q567U6 631 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 ATXN7L2Q5T6C5 722 aaPredicted RBP4.76□□□□□ -1.65
ATRX-209ENST00000623242 DARS2Q6PI48 645 aaKnown RBP4.76□□□□□ -1.65
ATRX-209ENST00000623242 Q6ZRM9 215 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 LRTOMTQ8WZ04 291 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 ANKS1AQ92625 1134 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 NEU1Q99519 415 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 MYD88Q99836 296 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 SHANK3Q9BYB0 1731 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 LRRCC1Q9C099 1032 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 GSTO2Q9H4Y5 243 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 SPON1Q9HCB6 807 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 MAP3K2Q9Y2U5 619 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 TOGARAM1Q9Y4F4 1720 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 NHSQ6T4R5 1651 aa4.76□□□□□ -1.65
ATRX-209ENST00000623242 BRWD3Q6RI45 1802 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 KLRG2A4D1S0 409 aaPredicted RBP4.75□□□□□ -1.65
ATRX-209ENST00000623242 PI4KAP2A4QPH2 592 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 DRGXA6NNA5 263 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 MYO1FO00160 1098 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 PHGDHO43175 533 aaKnown RBP4.75□□□□□ -1.65
ATRX-209ENST00000623242 ZNF623O75123 536 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 RPS6KA4O75676 772 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 POMCP01189 267 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 SCNN1GP51170 649 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 G3BP1Q13283 466 aaKnown RBP eCLIP4.75□□□□□ -1.65
ATRX-209ENST00000623242 NFIXQ14938 502 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 HSP90AB3PQ58FF7 597 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 BMP2KLQ5H9B9 411 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 KHDC1LQ5JSQ8 128 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 METTL24Q5JXM2 366 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 PPP4R4Q6NUP7 873 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 DRICH1Q6PGQ1 229 aaPredicted RBP4.75□□□□□ -1.65
ATRX-209ENST00000623242 ZNF365Q70YC5 407 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 HTR3DQ70Z44 454 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 G2E3Q7L622 706 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 ZFPM1Q8IX07 1006 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 SMC5Q8IY18 1101 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 CLASRPQ8N2M8 674 aaKnown RBP4.75□□□□□ -1.65
ATRX-209ENST00000623242 PI4KAP1Q8N8J0 262 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 OR10H5Q8NGA6 315 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 ZFP28Q8NHY6 868 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 TNPO1Q92973 898 aaKnown RBP4.75□□□□□ -1.65
ATRX-209ENST00000623242 MIEF2Q96C03 454 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 MTFMTQ96DP5 389 aaKnown RBP4.75□□□□□ -1.65
ATRX-209ENST00000623242 PACSIN1Q9BY11 444 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 SLAMF7Q9NQ25 335 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 JKAMPQ9P055 326 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 USP25Q9UHP3 1055 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 KCPQ6ZWJ8 1503 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 COL15A1P39059 1388 aa4.75□□□□□ -1.65
ATRX-209ENST00000623242 CCDC78A2IDD5 438 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 CDHR4A6H8M9 788 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 CAPN14A8MX76 684 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 LEFTY2O00292 366 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 TBX3O15119 743 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 FRS3O43559 492 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 PQBP1O60828 265 aaKnown RBP4.74□□□□□ -1.65
ATRX-209ENST00000623242 MFAP3LO75121 409 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 IPO13O94829 963 aaKnown RBP4.74□□□□□ -1.65
ATRX-209ENST00000623242 HAUS5O94927 633 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 IGHDP01880 384 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 ITGB1P05556 798 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 GJB1P08034 283 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 MYL3P08590 195 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 IFIT2P09913 472 aaKnown RBP4.74□□□□□ -1.65
ATRX-209ENST00000623242 MYF5P13349 255 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 ACO1P21399 889 aaKnown RBP4.74□□□□□ -1.65
ATRX-209ENST00000623242 COMTP21964 271 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 GPTP24298 496 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 CHN2P52757 468 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 ARFIP2P53365 341 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 CACNB3P54284 484 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 SOX8P57073 446 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 KIF22Q14807 665 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 POLD3Q15054 466 aaPredicted RBP4.74□□□□□ -1.65
ATRX-209ENST00000623242 SLC15A2Q16348 729 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 DCAF17Q5H9S7 520 aaPredicted RBP4.74□□□□□ -1.65
ATRX-209ENST00000623242 UTP14CQ5TAP6 766 aaKnown RBP4.74□□□□□ -1.65
ATRX-209ENST00000623242 EMC10Q5UCC4 262 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 NAIF1Q69YI7 327 aaPredicted RBP4.74□□□□□ -1.65
ATRX-209ENST00000623242 EFCAB12Q6NXP0 572 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 SMIM5Q71RC9 77 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 MED25Q71SY5 747 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 SGMS1Q86VZ5 419 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 CNTROBQ8N137 903 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 KRT78Q8N1N4 520 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 ANKRD35Q8N283 1001 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 ANKRD44Q8N8A2 993 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 TMIEQ8NEW7 156 aa4.74□□□□□ -1.65
ATRX-209ENST00000623242 BRIX1Q8TDN6 353 aaKnown RBP4.74□□□□□ -1.65
ATRX-209ENST00000623242 PARD3BQ8TEW8 1205 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms