RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 NXF3Q9H4D5 531 aaKnown RBP18.61■□□□□ 0.57
ZNF48-206ENST00000622647 GJD2Q9UKL4 321 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 SCN1AP35498 2009 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 PDGFRBP09619 1106 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 KDELR1P24390 212 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 MMP13P45452 471 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 GOLGA7BQ2TAP0 167 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 HIBCHQ6NVY1 386 aaPredicted RBP18.61■□□□□ 0.57
ZNF48-206ENST00000622647 PNMA8AQ86V59 439 aaPredicted RBP18.61■□□□□ 0.57
ZNF48-206ENST00000622647 ANKMY2Q8IV38 441 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 ALLCQ8N6M5 410 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 DNAJB3Q8WWF6 145 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 MIS12Q9H081 205 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 INTS9Q9NV88 658 aaKnown RBP18.61■□□□□ 0.57
ZNF48-206ENST00000622647 DDX20Q9UHI6 824 aaKnown RBP18.61■□□□□ 0.57
ZNF48-206ENST00000622647 BARX2Q9UMQ3 279 aaPredicted RBP18.61■□□□□ 0.57
ZNF48-206ENST00000622647 NME7Q9Y5B8 376 aa18.61■□□□□ 0.57
ZNF48-206ENST00000622647 AGTP01019 485 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 MAGEA4P43358 317 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 VCPP55072 806 aaKnown RBP18.6■□□□□ 0.57
ZNF48-206ENST00000622647 TAP1Q03518 808 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 GRB14Q14449 540 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 CCL14Q16627 93 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 FAM183BPQ6ZVS7 135 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 SCUBE3Q8IX30 993 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 PEBP4Q96S96 227 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 B3GNT5Q9BYG0 378 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 ABHD16BQ9H3Z7 469 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 FLRT1Q9NZU1 646 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 SMIM10L2AP0DMW4 78 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 SMIM10L2BP0DMW5 78 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 VDRP11473 427 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 P4HA1P13674 534 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 GCLCP48506 637 aaPredicted RBP18.6■□□□□ 0.57
ZNF48-206ENST00000622647 HADHQ16836 314 aaKnown RBP18.6■□□□□ 0.57
ZNF48-206ENST00000622647 LRRC38Q5VT99 294 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 RXFP2Q8WXD0 754 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 CFAP57Q96MR6 1250 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 DPEP3Q9H4B8 488 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 GOLGA2P5Q9HBQ8 144 aa18.6■□□□□ 0.57
ZNF48-206ENST00000622647 DDX56Q9NY93 547 aaKnown RBP18.6■□□□□ 0.57
ZNF48-206ENST00000622647 CYP2C9P11712 490 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 PDGFRAP16234 1089 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 POU5F1BQ06416 359 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 MYO1EQ12965 1108 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 CNGA2Q16280 664 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 ERMARDQ5T6L9 678 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 IFNLR1Q8IU57 520 aaPredicted RBP18.59■□□□□ 0.57
ZNF48-206ENST00000622647 MICALL1Q8N3F8 863 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 TMEM40Q8WWA1 233 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 TRIM6Q9C030 488 aaPredicted RBP18.59■□□□□ 0.57
ZNF48-206ENST00000622647 MORF4L1Q9UBU8 362 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 POC1B-GALNT4F8VUJ3 575 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 DNALI1O14645 258 aaPredicted RBP18.59■□□□□ 0.57
ZNF48-206ENST00000622647 IBSPP21815 317 aaPredicted RBP18.59■□□□□ 0.57
ZNF48-206ENST00000622647 ATICP31939 592 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 YARSP54577 528 aaKnown RBP18.59■□□□□ 0.57
ZNF48-206ENST00000622647 OASLQ15646 514 aaKnown RBP18.59■□□□□ 0.57
ZNF48-206ENST00000622647 SPRYD7Q5W111 196 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 PMF1Q6P1K2 205 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 ZC3H18Q86VM9 953 aaKnown RBP18.59■□□□□ 0.57
ZNF48-206ENST00000622647 CCDC33Q8N5R6 958 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 NIPA2Q8N8Q9 360 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 OR6B3Q8NGW1 331 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 GDAP1Q8TB36 358 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 EMID1Q96A84 441 aaPredicted RBP18.59■□□□□ 0.57
ZNF48-206ENST00000622647 NT5C1AQ9BXI3 368 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 RNF39Q9H2S5 420 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 ADAMTS10Q9H324 1103 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 USP18Q9UMW8 372 aa18.59■□□□□ 0.57
ZNF48-206ENST00000622647 RNF8O76064 485 aa18.58■□□□□ 0.57
ZNF48-206ENST00000622647 PFKMP08237 780 aa18.58■□□□□ 0.57
ZNF48-206ENST00000622647 ANKRD22Q5VYY1 191 aa18.58■□□□□ 0.57
ZNF48-206ENST00000622647 ANKRD23Q86SG2 305 aa18.58■□□□□ 0.57
ZNF48-206ENST00000622647 UNC45BQ8IWX7 931 aa18.58■□□□□ 0.57
ZNF48-206ENST00000622647 ATXN2LQ8WWM7 1075 aaKnown RBP18.58■□□□□ 0.57
ZNF48-206ENST00000622647 FAM129AQ9BZQ8 928 aa18.58■□□□□ 0.57
ZNF48-206ENST00000622647 CNOT10Q9H9A5 744 aaKnown RBP18.58■□□□□ 0.57
ZNF48-206ENST00000622647 ITGA11Q9UKX5 1188 aa18.58■□□□□ 0.57
ZNF48-206ENST00000622647 TPX2Q9ULW0 747 aaKnown RBP18.58■□□□□ 0.57
ZNF48-206ENST00000622647 CITO14578 2027 aa18.58■□□□□ 0.57
ZNF48-206ENST00000622647 VIMP08670 466 aaKnown RBP18.58■□□□□ 0.56
ZNF48-206ENST00000622647 CYP2B6P20813 491 aa18.58■□□□□ 0.56
ZNF48-206ENST00000622647 ZNF268Q14587 947 aaPredicted RBP18.58■□□□□ 0.56
ZNF48-206ENST00000622647 ZNF618Q5T7W0 954 aa18.58■□□□□ 0.56
ZNF48-206ENST00000622647 OLFML2BQ68BL8 750 aa18.58■□□□□ 0.56
ZNF48-206ENST00000622647 SRRM1Q8IYB3 904 aaKnown RBP18.58■□□□□ 0.56
ZNF48-206ENST00000622647 CCDC13Q8IYE1 715 aa18.58■□□□□ 0.56
ZNF48-206ENST00000622647 ZBED8Q8IZ13 594 aa18.58■□□□□ 0.56
ZNF48-206ENST00000622647 GTF3C2Q8WUA4 911 aaPredicted RBP18.58■□□□□ 0.56
ZNF48-206ENST00000622647 MAGEB5Q9BZ81 275 aa18.58■□□□□ 0.56
ZNF48-206ENST00000622647 CYP3A43Q9HB55 503 aa18.58■□□□□ 0.56
ZNF48-206ENST00000622647 RRAGCQ9HB90 399 aa18.58■□□□□ 0.56
ZNF48-206ENST00000622647 NGRNQ9NPE2 291 aaKnown RBP18.58■□□□□ 0.56
ZNF48-206ENST00000622647 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.58■□□□□ 0.56
ZNF48-206ENST00000622647 NAALADL1Q9UQQ1 740 aa18.58■□□□□ 0.56
ZNF48-206ENST00000622647 LOC102724159A0A0B4J2E5 919 aa18.57■□□□□ 0.56
ZNF48-206ENST00000622647 TREHO43280 583 aa18.57■□□□□ 0.56
ZNF48-206ENST00000622647 CDH6P55285 790 aa18.57■□□□□ 0.56
ZNF48-206ENST00000622647 CAV1Q03135 178 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms