RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 ACADSBP45954 432 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 YWHAHQ04917 246 aaPredicted RBP17.46■□□□□ 0.39
PCGF3-213ENST00000620529 PPP1R15BQ5SWA1 713 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 FAM102AQ5T9C2 384 aaPredicted RBP17.46■□□□□ 0.39
PCGF3-213ENST00000620529 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.46■□□□□ 0.39
PCGF3-213ENST00000620529 CRIPAKQ8N1N5 446 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 LRRC43Q8N309 656 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 MCRS1Q96EZ8 462 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 COLEC11Q9BWP8 271 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 SLC4A5Q9BY07 1137 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 MCOLN1Q9GZU1 580 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 CARD9Q9H257 536 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 CRTAC1Q9NQ79 661 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 CYLDQ9NQC7 956 aa17.46■□□□□ 0.39
PCGF3-213ENST00000620529 ABHD14A-ACY1A0A1B0GW23 586 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 TRIM43BA6NCK2 446 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 PIK3R2O00459 728 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 NRP1O14786 923 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 XPO1O14980 1071 aaKnown RBP17.46■□□□□ 0.38
PCGF3-213ENST00000620529 FAM200BP0CF97 657 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 MAN1A1P33908 653 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 CTNNA1P35221 906 aaKnown RBP17.46■□□□□ 0.38
PCGF3-213ENST00000620529 TSPY1Q01534 308 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 PLCB3Q01970 1234 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 PIGHQ14442 188 aaPredicted RBP17.46■□□□□ 0.38
PCGF3-213ENST00000620529 KIAA0319Q5VV43 1072 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 ZDHHC17Q8IUH5 632 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 FUKQ8N0W3 1084 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 TRIM43Q96BQ3 446 aaPredicted RBP17.46■□□□□ 0.38
PCGF3-213ENST00000620529 MS4A14Q96JA4 679 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 TMEM175Q9BSA9 504 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 DUSP16Q9BY84 665 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 ADAM28Q9UKQ2 775 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 FAN1Q9Y2M0 1017 aa17.46■□□□□ 0.38
PCGF3-213ENST00000620529 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.46■□□□□ 0.38
PCGF3-213ENST00000620529 TULP2O00295 520 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 CLDN5O00501 218 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 DYNC1I1O14576 645 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 CSF2RAP15509 400 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 NPR3P17342 541 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 SSR1P43307 286 aaKnown RBP17.45■□□□□ 0.38
PCGF3-213ENST00000620529 PLA2G4AP47712 749 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 MAPRE1Q15691 268 aaKnown RBP17.45■□□□□ 0.38
PCGF3-213ENST00000620529 INTS6LQ5JSJ4 861 aaKnown RBP17.45■□□□□ 0.38
PCGF3-213ENST00000620529 FAM183BPQ6ZVS7 135 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 TMEM110Q86TL2 294 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 MYCBPAPQ8TBZ2 947 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 CD101Q93033 1021 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 HSFY1Q96LI6 401 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 PLVAPQ9BX97 442 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 PRDM10Q9NQV6 1147 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 USTQ9Y2C2 406 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 PCDHA3Q9Y5H8 950 aa17.45■□□□□ 0.38
PCGF3-213ENST00000620529 MYBPHLA2RUH7 354 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 PGRMC1O00264 195 aaKnown RBP17.44■□□□□ 0.38
PCGF3-213ENST00000620529 PDE2AO00408 941 aaPredicted RBP17.44■□□□□ 0.38
PCGF3-213ENST00000620529 EFCAB14O75071 495 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 AMHP03971 560 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 RWDD2BP57060 319 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 CLUL1Q15846 466 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 ERCC6LQ2NKX8 1250 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 SEL1L2Q5TEA6 688 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 MFSD5Q6N075 450 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 ZNF572Q7Z3I7 529 aaPredicted RBP17.44■□□□□ 0.38
PCGF3-213ENST00000620529 FAM35AQ86V20 835 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 ACTRT1Q8TDG2 376 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 FNIP1Q8TF40 1166 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 KRT35Q92764 455 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 PCED1BQ96HM7 432 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 B3GNT5Q9BYG0 378 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 KRT82Q9NSB4 513 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 EHD2Q9NZN4 543 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 SYN3O14994 580 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 PSMA2P25787 234 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 RFC1P35251 1148 aaPredicted RBP17.44■□□□□ 0.38
PCGF3-213ENST00000620529 SLC11A1P49279 550 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 RNASE9P60153 205 aaKnown RBP17.44■□□□□ 0.38
PCGF3-213ENST00000620529 ITIH3Q06033 890 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 CCDC142Q17RM4 750 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 RSRC2Q7L4I2 434 aaKnown RBP17.44■□□□□ 0.38
PCGF3-213ENST00000620529 CPNE8Q86YQ8 564 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 JOSD2Q8TAC2 188 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 ALG3Q92685 438 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 RTP3Q9BQQ7 232 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 SMARCAL1Q9NZC9 954 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 PRKAG2Q9UGJ0 569 aa17.44■□□□□ 0.38
PCGF3-213ENST00000620529 VWA8A3KMH1 1905 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 SF3B1O75533 1304 aaKnown RBP eCLIP17.43■□□□□ 0.38
PCGF3-213ENST00000620529 PSTPIP1O43586 416 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 AP1G2O75843 785 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 DESP17661 470 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 ITGB8P26012 769 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 C2orf54Q08AI8 447 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 ELAVL2Q12926 359 aaKnown RBP17.43■□□□□ 0.38
PCGF3-213ENST00000620529 ELF2Q15723 593 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 RHOT1Q8IXI2 618 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 RASGEF1CQ8N431 466 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 NIPA2Q8N8Q9 360 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 SPATA4Q8NEY3 305 aa17.43■□□□□ 0.38
PCGF3-213ENST00000620529 SMARCD1Q96GM5 515 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms