RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 ATXN2LQ8WWM7 1075 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 DNAJC18Q9H819 358 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 CAMTA1Q9Y6Y1 1673 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 TISP43B9A030 160 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 KLHL2O95198 593 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 TCF7P36402 384 aaPredicted RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 MTHFD1LQ6UB35 978 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 SUGP1Q8IWZ8 645 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 DDIASQ8IXT1 998 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 SMARCAD1Q9H4L7 1026 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 TJP2Q9UDY2 1190 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 PIN4Q9Y237 131 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 EEF2KO00418 725 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 CYBBP04839 570 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 NAMPTP43490 491 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 FLOT2Q14254 428 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 ZNF235Q14590 738 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 PGM5Q15124 567 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 THEMIS2Q5TEJ8 643 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 IER5Q5VY09 327 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 LRRC8EQ6NSJ5 796 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 MTDHQ86UE4 582 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 EIF1ADQ8N9N8 165 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 NKX2-3Q8TAU0 364 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 TRIM62Q9BVG3 475 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 NT5C1AQ9BXI3 368 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 KCTD10Q9H3F6 313 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 EML4Q9HC35 981 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 TMEM150BA6NC51 233 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 SYCE1LA8MT33 242 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 PDGFRBP09619 1106 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 RCN1Q15293 331 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 PRAMEF18Q5VWM3 479 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 APPL2Q8NEU8 664 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 MTBPQ96DY7 904 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 DCUN1D1Q96GG9 259 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 TMEM120AQ9BXJ8 343 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 EN1Q05925 392 aaPredicted RBP8.68□□□□□ -1.02
ALMS1-208ENST00000620466 NUDT18Q6ZVK8 323 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 SV2AQ7L0J3 742 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 KDELC2Q7Z4H8 507 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 ZFYVE19Q96K21 471 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 SH3GL3Q99963 347 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 CTNNAL1Q9UBT7 734 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 SPEF2Q9C093 1822 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 CYP3A7-CYP3A51PA0A087WV96 503 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 ARHGAP10A1A4S6 786 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 SUPT20HL2P0C7V6 817 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 CYP3A7P24462 503 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 RHBDL3P58872 404 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 TEDDM1Q5T9Z0 273 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 CDR2LQ86X02 465 aaPredicted RBP8.68□□□□□ -1.02
ALMS1-208ENST00000620466 KRT35Q92764 455 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 RMDN1Q96DB5 314 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 PGM2Q96G03 612 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 SIK2Q9H0K1 926 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 YY1AP1Q9H869 796 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 PARP4Q9UKK3 1724 aaKnown RBP8.68□□□□□ -1.02
ALMS1-208ENST00000620466 CCDC78A2IDD5 438 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 CYP3A4P08684 503 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 PTK6Q13882 451 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 ZC3H12BQ5HYM0 836 aaKnown RBP8.68□□□□□ -1.02
ALMS1-208ENST00000620466 C16orf89Q6UX73 402 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 C1orf186Q6ZWK4 172 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 USP33Q8TEY7 942 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 GRID1Q9ULK0 1009 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 ASMTLO95671 621 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 SERPIND1P05546 499 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 MYL2P10916 166 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 SERPINB4P48594 390 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 PRAMEP78395 509 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 TRADDQ15628 312 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 RABGAP1LQ5R372 815 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 ABRAQ8N0Z2 381 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 HPDLQ96IR7 371 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 TNIP3Q96KP6 325 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 PCDHB8Q9UN66 801 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 ANKRD63C9JTQ0 380 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 RBAK-RBAKDNI3L0D1 243 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 DENND5BQ6ZUT9 1274 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 ARID3BQ8IVW6 561 aaPredicted RBP8.68□□□□□ -1.02
ALMS1-208ENST00000620466 EFHBQ8N7U6 833 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 TMA16Q96EY4 203 aaKnown RBP8.68□□□□□ -1.02
ALMS1-208ENST00000620466 FAM163AQ96GL9 167 aaPredicted RBP8.68□□□□□ -1.02
ALMS1-208ENST00000620466 ELMO2Q96JJ3 720 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 SPON2Q9BUD6 331 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 TASP1Q9H6P5 420 aa8.68□□□□□ -1.02
ALMS1-208ENST00000620466 GAKO14976 1311 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 TADA2AO75478 443 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ARIH2O95376 493 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 BGNP21810 368 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 RARRES1P49788 294 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 IRX1P78414 480 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 MED21Q13503 144 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 APOBEC3HQ6NTF7 200 aaKnown RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 CATSPER1Q8NEC5 780 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 SYTL5Q8TDW5 730 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 STAMBPL1Q96FJ0 436 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 NAF1Q96HR8 494 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms