RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 CCDC40Q4G0X9 1142 aa8.78□□□□□ -1
NEK3-209ENST00000618856 FAM78AQ5JUQ0 283 aa8.78□□□□□ -1
NEK3-209ENST00000618856 CCDC183Q5T5S1 534 aa8.78□□□□□ -1
NEK3-209ENST00000618856 TCERG1LQ5VWI1 586 aa8.78□□□□□ -1
NEK3-209ENST00000618856 DPY19L2P1Q6NXN4 242 aa8.78□□□□□ -1
NEK3-209ENST00000618856 SCARA5Q6ZMJ2 495 aa8.78□□□□□ -1
NEK3-209ENST00000618856 ACOT1Q86TX2 421 aa8.78□□□□□ -1
NEK3-209ENST00000618856 EHBP1Q8NDI1 1231 aa8.78□□□□□ -1
NEK3-209ENST00000618856 ZMIZ2Q8NF64 920 aa8.78□□□□□ -1
NEK3-209ENST00000618856 ENOX1Q8TC92 643 aaKnown RBP8.78□□□□□ -1
NEK3-209ENST00000618856 GIPC2Q8TF65 315 aa8.78□□□□□ -1
NEK3-209ENST00000618856 RSAD2Q8WXG1 361 aa8.78□□□□□ -1
NEK3-209ENST00000618856 SMARCD2Q92925 531 aa8.78□□□□□ -1
NEK3-209ENST00000618856 HNRNPABQ99729 332 aaKnown RBP8.78□□□□□ -1
NEK3-209ENST00000618856 ARID3AQ99856 593 aa8.78□□□□□ -1
NEK3-209ENST00000618856 ZNF518BQ9C0D4 1074 aa8.78□□□□□ -1
NEK3-209ENST00000618856 SMOC2Q9H3U7 446 aa8.78□□□□□ -1
NEK3-209ENST00000618856 MMRN2Q9H8L6 949 aa8.78□□□□□ -1
NEK3-209ENST00000618856 CISHQ9NSE2 258 aa8.78□□□□□ -1
NEK3-209ENST00000618856 TMEM63CQ9P1W3 806 aa8.78□□□□□ -1
NEK3-209ENST00000618856 DACH1Q9UI36 760 aa8.78□□□□□ -1
NEK3-209ENST00000618856 CNTN6Q9UQ52 1028 aa8.78□□□□□ -1
NEK3-209ENST00000618856 OBSL1O75147 1896 aa8.78□□□□□ -1
NEK3-209ENST00000618856 NCANO14594 1321 aa8.78□□□□□ -1
NEK3-209ENST00000618856 MYO10Q9HD67 2058 aa8.77□□□□□ -1
NEK3-209ENST00000618856 COL4A2P08572 1712 aa8.77□□□□□ -1
NEK3-209ENST00000618856 NUP210Q8TEM1 1887 aaPredicted RBP8.77□□□□□ -1.01
NEK3-209ENST00000618856 HHLA1C9JL84 531 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 F8VP50 259 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 ARNTLO00327 626 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 CLDN5O00501 218 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 NARSO43776 548 aaKnown RBP8.77□□□□□ -1.01
NEK3-209ENST00000618856 AFPP02771 609 aaKnown RBP8.77□□□□□ -1.01
NEK3-209ENST00000618856 SRFP11831 508 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 MYL4P12829 197 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 GJA1P17302 382 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 DDX6P26196 483 aaKnown RBP eCLIP8.77□□□□□ -1.01
NEK3-209ENST00000618856 GABRR2P28476 465 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 CDR1P51861 262 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 ZNF132P52740 706 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 RAD23BP54727 409 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 USP46P62068 366 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 CYP27A1Q02318 531 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 GCNT1Q02742 428 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 FCHO2Q0JRZ9 810 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 WDR44Q5JSH3 913 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 STXBP5Q5T5C0 1151 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 SDHAF4Q5VUM1 108 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 CDKAL1Q5VV42 579 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 SNX30Q5VWJ9 437 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 ARHGAP17Q68EM7 881 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 TANGO2Q6ICL3 276 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 FAM35AQ86V20 835 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 MON1AQ86VX9 555 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 C12orf29Q8N999 325 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 SLC4A11Q8NBS3 891 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 CCDC150Q8NCX0 1101 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 GPR152Q8TDT2 470 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 ING5Q8WYH8 240 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 JAKMIP2Q96AA8 810 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 E2F7Q96AV8 911 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 RSPRY1Q96DX4 576 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 MCRS1Q96EZ8 462 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 CNOT6LQ96LI5 555 aaKnown RBP8.77□□□□□ -1.01
NEK3-209ENST00000618856 SMOQ99835 787 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 LRFN3Q9BTN0 628 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 NT5C1AQ9BXI3 368 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 SLC46A2Q9BY10 475 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 PLA2G2FQ9BZM2 168 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 UBXN6Q9BZV1 441 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 TASP1Q9H6P5 420 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 PNPLA8Q9NP80 782 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 TRPV5Q9NQA5 729 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 COMMD8Q9NX08 183 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 OBP2AQ9NY56 170 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 WNT16Q9UBV4 365 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.77□□□□□ -1.01
NEK3-209ENST00000618856 DENND4CQ5VZ89 1909 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 PATJQ8NI35 1801 aa8.77□□□□□ -1.01
NEK3-209ENST00000618856 KIF26AQ9ULI4 1882 aaPredicted RBP8.77□□□□□ -1.01
NEK3-209ENST00000618856 DMDP11532 3685 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 TMEM221A6NGB7 291 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 M0R296 226 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 BEST1O76090 585 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 OLFM2O95897 454 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 ZDHHC11BP0C7U3 371 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 TCF3P15923 654 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 PFKLP17858 780 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 TBXAS1P24557 533 aaPredicted RBP8.76□□□□□ -1.01
NEK3-209ENST00000618856 GRIK1P39086 918 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 PPP3CCP48454 512 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 MLLT6P55198 1093 aaPredicted RBP8.76□□□□□ -1.01
NEK3-209ENST00000618856 ZNF268Q14587 947 aaPredicted RBP8.76□□□□□ -1.01
NEK3-209ENST00000618856 NCAPHQ15003 741 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 MIIPQ5JXC2 388 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 TMEM31Q5JXX7 168 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 PHLDB3Q6NSJ2 640 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 DENND5BQ6ZUT9 1274 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 MFSD6LQ8IWD5 586 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 NUP93Q8N1F7 819 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms