RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 RUSC1Q9BVN2 902 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 VTI1BQ9UEU0 232 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 GTF3C4Q9UKN8 822 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 PNMA8BQ9ULN7 279 aaPredicted RBP3.18□□□□□ -1.9
LPP-221ENST00000618621 KLRC4O43908 158 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 SNUPNO95149 360 aaKnown RBP3.18□□□□□ -1.9
LPP-221ENST00000618621 SPRP35270 261 aaPredicted RBP3.18□□□□□ -1.9
LPP-221ENST00000618621 GIT2Q14161 759 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 ABRAQ8N0Z2 381 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 KIAA0895Q8NCT3 520 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 DACT3Q96B18 629 aaPredicted RBP3.18□□□□□ -1.9
LPP-221ENST00000618621 BRD8Q9H0E9 1235 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 OLFML3Q9NRN5 406 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 SLC38A7Q9NVC3 462 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 SLC8A2Q9UPR5 921 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 PCDHGA3Q9Y5H0 932 aa3.18□□□□□ -1.9
LPP-221ENST00000618621 DNM1LO00429 736 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 KDM1AO60341 852 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SOAT2O75908 522 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TMCC1O94876 653 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 KRT8P05787 483 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PYGLP06737 847 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 RASA1P20936 1047 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TMED10P49755 219 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 VPS33AQ96AX1 596 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 NT5C1AQ9BXI3 368 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ACAD9Q9H845 621 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SORCS3Q9UPU3 1222 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ASB14A6NK59 587 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 HLA-DRAP01903 254 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 RARBP10826 455 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 KLRK1P26718 216 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PRKAA2P54646 552 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 KCNMA1Q12791 1236 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 KRT33BQ14525 404 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TRIP10Q15642 601 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SEL1L3Q68CR1 1132 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 HEATR6Q6AI08 1181 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 LRRC6Q86X45 466 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 GDPD5Q8WTR4 605 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ZSCAN32Q9NX65 697 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TJP2Q9UDY2 1190 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ANXA9O76027 345 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 NDUFB10O96000 172 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 RRM1P23921 792 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CRABP2P29373 138 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CYP24A1Q07973 514 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 CATSPER4Q7RTX7 472 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SYTL5Q8TDW5 730 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 EPS8L3Q8TE67 593 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 PTPRN2Q92932 1015 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 NLRP4Q96MN2 994 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CRAMP1Q96RY5 1269 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PDGFRAP16234 1089 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 NAT1P18440 290 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 KIF22Q14807 665 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 C9orf131Q5VYM1 1079 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 C11orf63Q6NUN7 778 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SCARA5Q6ZMJ2 495 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 LUZP2Q86TE4 346 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ZFRQ96KR1 1074 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 SIKE1Q9BRV8 207 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 C17orf80Q9BSJ5 609 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 RNPEPL1Q9HAU8 725 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PNMA3Q9UL41 463 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 RUVBL2Q9Y230 463 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 CYP1A2P05177 515 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 GARTP22102 1010 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 MRPL28Q13084 256 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 LAMC2Q13753 1193 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TRMT5Q32P41 509 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 LRRC38Q5VT99 294 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 MYLK4Q86YV6 388 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 SNX19Q92543 992 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 MTMR9Q96QG7 549 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 MAF1Q9H063 256 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 UNC45AQ9H3U1 944 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ZMYND8Q9ULU4 1186 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 TRPM1Q7Z4N2 1603 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 RASSF9O75901 435 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 GSNP06396 782 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CPA3P15088 417 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TPI1P60174 286 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 OSTNP61366 133 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 DSG1Q02413 1049 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ZNF268Q14587 947 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 TMEM132DQ14C87 1099 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CNGA2Q16280 664 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CDR2LQ86X02 465 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 MAST1Q9Y2H9 1570 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 HSD3B2P26439 372 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ADCY1Q08828 1119 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SYCP2LQ5T4T6 812 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 MROH9Q5TGP6 573 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 B4GALNT2Q8NHY0 566 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SH3TC2Q8TF17 1288 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 EPAS1Q99814 870 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 EPS8L2Q9H6S3 715 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PTPRMP28827 1452 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms