RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ZC3H4Q9UPT8 1303 aaKnown RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 MGEA5O60502 916 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 KPNA2P52292 529 aaKnown RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 MAPK7Q13164 816 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 MSL3Q8N5Y2 521 aaKnown RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 KLHL29Q96CT2 875 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 ATP6V1G3Q96LB4 118 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 GAD1Q99259 594 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 PIDD1Q9HB75 910 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 ZCCHC17Q9NP64 241 aaKnown RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 KCND1Q9NSA2 647 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 KANSL3Q9P2N6 904 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 A0A0B4J269 797 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 MRPS6P82932 125 aaKnown RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 FAM172AQ8WUF8 416 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 PDCD6IPQ8WUM4 868 aaKnown RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 RXFP2Q8WXD0 754 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 ADAM2Q99965 735 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 SYT15Q9BQS2 421 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 TLR10Q9BXR5 811 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 RGS17Q9UGC6 210 aaPredicted RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 NEU2Q9Y3R4 380 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 WDR91A4D1P6 747 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 MAP3K7CLP57077 242 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 PDCLQ13371 301 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 PDK1Q15118 436 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 DBN1Q16643 649 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 SYCP2LQ5T4T6 812 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 SKA2Q8WVK7 121 aaPredicted RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 RNF208Q9H0X6 261 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 C2CD2LO14523 706 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 NOVP48745 357 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 TFDP3Q5H9I0 405 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 RNF219Q5W0B1 726 aaPredicted RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 NXNQ6DKJ4 435 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 VPS39Q96JC1 886 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 ATP11BQ9Y2G3 1177 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 COPEO14579 308 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 ACAT1P24752 427 aaKnown RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 ARL2P36404 184 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 CTXN3Q4LDR2 81 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 TRMT10CQ7L0Y3 403 aaKnown RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 EPM2AIP1Q7L775 607 aaPredicted RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 ANKMY2Q8IV38 441 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 EXD1Q8NHP7 514 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 DDX50Q9BQ39 737 aaKnown RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 TRPC7Q9HCX4 862 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 AVENQ9NQS1 362 aaPredicted RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 RNF19AQ9NV58 838 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 PAK5Q9P286 719 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 SIPA1L3O60292 1781 aaPredicted RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 DPYSL4O14531 572 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 MICAL2O94851 1124 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 ARF4P18085 180 aaPredicted RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 RECQLP46063 649 aaPredicted RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 ZNF268Q14587 947 aaPredicted RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 ZNF235Q14590 738 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 STAT4Q14765 748 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 TERF2Q15554 542 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 ATG4AQ8WYN0 398 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 C9orf72Q96LT7 481 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 LBHD1Q9BQE6 289 aaPredicted RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 WRAP73Q9P2S5 460 aaPredicted RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 UNCXA6NJT0 531 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 RNF225M0QZC1 329 aaPredicted RBP14.5□□□□□ -0.09
CIITA-213ENST00000618327 MCL1Q07820 350 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 OVOS1Q6IE37 1185 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 DEFB128Q7Z7B8 93 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 ARHGAP18Q8N392 663 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 ATPAF2Q8N5M1 289 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 STKLD1Q8NE28 680 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 PNKPQ96T60 521 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 FOXP3Q9BZS1 431 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 USP18Q9UMW8 372 aa14.5□□□□□ -0.09
CIITA-213ENST00000618327 TJP1Q07157 1748 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 H7C4K7 107 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 FBXO21O94952 628 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 ALDH2P05091 517 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 STMN1P16949 149 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 CRYBB1P53674 252 aaPredicted RBP14.49□□□□□ -0.09
CIITA-213ENST00000618327 SESN2P58004 480 aaPredicted RBP14.49□□□□□ -0.09
CIITA-213ENST00000618327 AGAP3Q96P47 875 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 WDCPQ9H6R7 721 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 SMYD3Q9H7B4 428 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 ALDH1A3P47895 512 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 ITGA8P53708 1063 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 PPP2R2AP63151 447 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 SATB1Q01826 763 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 ASPHQ12797 758 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 SPARCL1Q14515 664 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 RPS6KA2Q15349 733 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 C10orf120Q5SQS8 335 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 NDUFAF2Q8N183 169 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 MAGEB5Q9BZ81 275 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 C2CD2Q9Y426 696 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 DHX15O43143 795 aaKnown RBP14.49□□□□□ -0.09
CIITA-213ENST00000618327 F9P00740 461 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 HMGCRP04035 888 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 BRAFP15056 766 aa14.49□□□□□ -0.09
CIITA-213ENST00000618327 EPHB2P29323 1055 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms