RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CCT8L2Q96SF2 557 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 TRAIPQ9BWF2 469 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 B3GNT5Q9BYG0 378 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 GCOM2Q9BZD3 368 aaPredicted RBP13.05□□□□□ -0.32
CIITA-212ENST00000618207 BARX2Q9UMQ3 279 aaPredicted RBP13.05□□□□□ -0.32
CIITA-212ENST00000618207 RECQL4O94761 1208 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 MIPP30301 263 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 GBP1P32455 592 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 CDH5P33151 784 aaPredicted RBP13.05□□□□□ -0.32
CIITA-212ENST00000618207 CDKN2BP42772 138 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 ZNF157P51786 506 aaPredicted RBP13.05□□□□□ -0.32
CIITA-212ENST00000618207 OTUD4Q01804 1114 aaKnown RBP13.05□□□□□ -0.32
CIITA-212ENST00000618207 GOLGA7BQ2TAP0 167 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 IQSEC1Q6DN90 963 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 SRLQ86TD4 932 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 TAX1BP1Q86VP1 789 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 CCDC89Q8N998 374 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 ACTL9Q8TC94 416 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 KAT2BQ92831 832 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
CIITA-212ENST00000618207 NT5C1AQ9BXI3 368 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 EPN3Q9H201 632 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 DPEP3Q9H4B8 488 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 GPATCH2LQ9NWQ4 482 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
CIITA-212ENST00000618207 RNF8O76064 485 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 PAEPP09466 180 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 CHN1P15882 459 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 MAN1A1P33908 653 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 POU5F1BQ06416 359 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 LRRC14Q15048 493 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 ZNF618Q5T7W0 954 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 PPP1R2P3Q6NXS1 205 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 NLRP14Q86W24 1093 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 RFX6Q8HWS3 928 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 CFAP57Q96MR6 1250 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 NGRNQ9NPE2 291 aaKnown RBP13.04□□□□□ -0.32
CIITA-212ENST00000618207 SCN4AP35499 1836 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 MYO1CO00159 1063 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 VDRP11473 427 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 ADORA2BP29275 332 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 GDF10P55107 478 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 SLC25A11Q02978 314 aaKnown RBP13.04□□□□□ -0.32
CIITA-212ENST00000618207 GAD2Q05329 585 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 MYO1EQ12965 1108 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 FASTKD3Q14CZ7 662 aaKnown RBP13.04□□□□□ -0.32
CIITA-212ENST00000618207 CCDC142Q17RM4 750 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 TRNP1Q6NT89 227 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 PMF1Q6P1K2 205 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 RHBDF2Q6PJF5 856 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 NPNTQ6UXI9 565 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 FAM183BPQ6ZVS7 135 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 ZC3H18Q86VM9 953 aaKnown RBP13.04□□□□□ -0.32
CIITA-212ENST00000618207 IFNLR1Q8IU57 520 aaPredicted RBP13.04□□□□□ -0.32
CIITA-212ENST00000618207 CCDC33Q8N5R6 958 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 MYCBPAPQ8TBZ2 947 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 RBM15Q96T37 977 aaKnown RBP eCLIP13.04□□□□□ -0.32
CIITA-212ENST00000618207 LHX5Q9H2C1 402 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 ADAMTS10Q9H324 1103 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 SAYSD1Q9NPB0 183 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 ITGA11Q9UKX5 1188 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 NME7Q9Y5B8 376 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 COL1A2P08123 1366 aa13.04□□□□□ -0.32
CIITA-212ENST00000618207 GPR32O75388 356 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 GTF2A1P52655 376 aaPredicted RBP13.03□□□□□ -0.32
CIITA-212ENST00000618207 AUHQ13825 339 aaKnown RBP13.03□□□□□ -0.32
CIITA-212ENST00000618207 MFSD10Q14728 455 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
CIITA-212ENST00000618207 SLC27A1Q6PCB7 646 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 ZNF467Q7Z7K2 595 aaPredicted RBP13.03□□□□□ -0.32
CIITA-212ENST00000618207 ZNF473Q8WTR7 871 aaKnown RBP13.03□□□□□ -0.32
CIITA-212ENST00000618207 RXFP2Q8WXD0 754 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 SLCO2A1Q92959 643 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 HOMER3Q9NSC5 361 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 USP18Q9UMW8 372 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 ATICP31939 592 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 GRM5P41594 1212 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 CNGA2Q16280 664 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 QPCTQ16769 361 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 TLCD1Q96CP7 247 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 PEBP4Q96S96 227 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.03□□□□□ -0.32
CIITA-212ENST00000618207 NINJ2Q9NZG7 142 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 NEU2Q9Y3R4 380 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 C2CD2Q9Y426 696 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 A8MXQ7 604 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 TTC4O95801 387 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 CCDC130P13994 396 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 KDELR1P24390 212 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 IGFBP6P24592 240 aaPredicted RBP13.03□□□□□ -0.32
CIITA-212ENST00000618207 KLRC2P26717 231 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 CDH6P55285 790 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 TAP1Q03518 808 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 C6orf118Q5T5N4 469 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 NOTUMQ6P988 496 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 ZNF410Q86VK4 478 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 TTC30AQ86WT1 665 aa13.03□□□□□ -0.32
CIITA-212ENST00000618207 ANKRD42Q8N9B4 389 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms