RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 DDR2Q16832 855 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 LMBRD2Q68DH5 695 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 TXNDC8Q6A555 127 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 LAIR1Q6GTX8 287 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 TRAPPC11Q7Z392 1133 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 LIMS2Q7Z4I7 341 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 TMEM150AQ86TG1 271 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 LONP2Q86WA8 852 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 SCN4BQ8IWT1 228 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 C12orf56Q8IXR9 622 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 OR5B17Q8NGF7 314 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 GOLGA5Q8TBA6 731 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 USP13Q92995 863 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 SPATA17Q96L03 361 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 CNTNAP3BQ96NU0 1288 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 MMS19Q96T76 1030 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 CGRRF1Q99675 332 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 CNTNAP3Q9BZ76 1288 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 SNX25Q9H3E2 840 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 RBM12Q9NTZ6 932 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 USP18Q9UMW8 372 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 PCDHA7Q9UN72 937 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 ATP6V1DQ9Y5K8 247 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 KMT2BQ9UMN6 2715 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 CHD8Q9HCK8 2581 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 MYH10P35580 1976 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 EML5Q05BV3 1969 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 DCDC2BA2VCK2 349 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 LRP3O75074 770 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 TACC1O75410 805 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 DLATP10515 647 aaKnown RBP12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 HOXA6P31267 233 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 GNL1P36915 607 aaPredicted RBP12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 GRIK1P39086 918 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 GPR15P49685 360 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 CYP2J2P51589 502 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 AP3M2P53677 418 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 LMNB2Q03252 620 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 EHHADHQ08426 723 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 NR1H3Q13133 447 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 PSMD2Q13200 908 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 SRSF5Q13243 272 aaKnown RBP12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 TRPC3Q13507 836 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 CCINQ13939 588 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 BMT2Q1RMZ1 405 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 FBXO43Q4G163 708 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 RESP18Q5W5W9 173 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 OSTM1Q86WC4 334 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 CPA6Q8N4T0 437 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 RDH13Q8NBN7 331 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 CCDC26Q8TAB7 109 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 TTC8Q8TAM2 541 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 HPS3Q969F9 1004 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 C2orf42Q9NWW7 574 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 USP25Q9UHP3 1055 aa12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 CDV3Q9UKY7 258 aaKnown RBP12.98□□□□□ -0.33
PDLIM2-218ENST00000614502 TRDMT1O14717 391 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 CLIC2O15247 247 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 TGFB1I1O43294 461 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 FOXD2O60548 495 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 STAU1O95793 577 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 MYL1P05976 194 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 CKMP06732 381 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 TCF3P15923 654 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 DRD1P21728 446 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 HOXD13P35453 343 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 IFNAR2P48551 515 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 KRT85P78386 507 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 CYP27A1Q02318 531 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 TNK2Q07912 1038 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 SPEM2Q0P670 501 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 SIM2Q14190 667 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 KCNB1Q14721 858 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 MTF1Q14872 753 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 KNOP1Q1ED39 458 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 SDHAF4Q5VUM1 108 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 TXNDC11Q6PKC3 985 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 Q6ZS52 159 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 DENND5BQ6ZUT9 1274 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 NELFCDQ8IXH7 590 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 GLIS3Q8NEA6 775 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 SCFD1Q8WVM8 642 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 KBTBD7Q8WVZ9 684 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 ATP2A3Q93084 1043 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 MYLPFQ96A32 169 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 CHAMP1Q96JM3 812 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 SMG9Q9H0W8 520 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 EBF3Q9H4W6 596 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 TRPC7Q9HCX4 862 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 CCL26Q9Y258 94 aa12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-218ENST00000614502 ATP8B3O60423 1300 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 PTPRJQ12913 1337 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 CCDC163A0A0D9SF12 145 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 CHURC1-FNTBB4DL54 471 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 HRO43593 1189 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 EXOC3O60645 756 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 PHACTR2O75167 634 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms