RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 PPARGP37231 505 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 IRAK1P51617 712 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 HAND2P61296 217 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 DCAF7P61962 342 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 MXRA7P84157 204 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PPP2R2BQ00005 443 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 RELAQ04206 551 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SLFN5Q08AF3 891 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PWP1Q13610 501 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 DHX34Q14147 1143 aaKnown RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 WDR43Q15061 677 aaKnown RBP eCLIP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ALG11Q2TAA5 492 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 GTDC1Q4AE62 458 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TCTE1Q5JU00 501 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CCNJQ5T5M9 372 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 C12orf60Q5U649 245 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 FYB2Q5VWT5 728 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 FAM205BPQ63HN1 556 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SLC6A19Q695T7 634 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ATL3Q6DD88 541 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 OGFOD3Q6PK18 319 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TXNDC11Q6PKC3 985 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PDZD4Q76G19 769 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 RAB11FIP2Q7L804 512 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 AKAP14Q86UN6 197 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ZNF677Q86XU0 584 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 AHI1Q8N157 1196 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 FBXL16Q8N461 479 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CCDC33Q8N5R6 958 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 MYCT1Q8N699 235 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 NOA1Q8NC60 698 aaKnown RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TTLL11Q8NHH1 800 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 MYCBPAPQ8TBZ2 947 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CAGE1Q8TC20 777 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SLC9A6Q92581 669 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TMIGD2Q96BF3 282 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 NLRP4Q96MN2 994 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PPP1R10Q96QC0 940 aaKnown RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 MKNK1Q9BUB5 465 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 STK33Q9BYT3 514 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PLEKHA4Q9H4M7 779 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 VIPAS39Q9H9C1 493 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 NOD2Q9HC29 1040 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 DNM3Q9UQ16 869 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 RPH3AQ9Y2J0 694 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TSC22D4Q9Y3Q8 395 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 AP1M2Q9Y6Q5 423 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CCDC78A2IDD5 438 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 A6NNZ2 444 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CAPN14A8MX76 684 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 MIF4GDA9UHW6 222 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 B8ZZF3 427 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 SLC9A3R1O14745 358 aaPredicted RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 RIPK2O43353 540 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 FZD6O60353 706 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ALBP02768 609 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 S100A9P06702 114 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ASGR1P07306 291 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 FAM153BP0C7A2 387 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CPB1P15086 417 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 GAP43P17677 238 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 MPSTP25325 297 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 PPP2R1AP30153 589 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CDC25BP30305 580 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 GSTT1P30711 240 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 PTGS2P35354 604 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 PPP1R2P41236 205 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 GARSP41250 739 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 VPS41P49754 854 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 DRG2P55039 364 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CYP4F2P78329 520 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TFAP4Q01664 338 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 OTUD4Q01804 1114 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TNFAIP2Q03169 654 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CYP4F3Q08477 520 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 C19orf57Q0VDD7 668 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 MYO1EQ12965 1108 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 DUSP4Q13115 394 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 DNAJC3Q13217 504 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ERV3-1Q14264 604 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 DHCR24Q15392 516 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TEAD4Q15561 434 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CWF19L2Q2TBE0 894 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ZCWPW2Q504Y3 356 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 XKR3Q5GH77 459 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TMEM240Q5SV17 173 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 HEATR6Q6AI08 1181 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ZSCAN25Q6NSZ9 544 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 PPP1R2P3Q6NXS1 205 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 OLFM4Q6UX06 510 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ZNF365Q70YC5 407 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ITIH5Q86UX2 942 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 PLA2G4DQ86XP0 818 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 KRT73Q86Y46 540 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 NOSTRINQ8IVI9 506 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 PPM1KQ8N3J5 372 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CCNYL1Q8N7R7 359 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 RNF139Q8WU17 664 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TUBGCP3Q96CW5 907 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ZC3H10Q96K80 434 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms