RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 NAF1Q96HR8 494 aaKnown RBP14.73□□□□□ -0.05
COL6A1-207ENST00000612273 TTC25Q96NG3 672 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 PORCNQ9H237 461 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 MANSC1Q9H8J5 431 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 PDLIM7Q9NR12 457 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 CNTNAP2Q9UHC6 1331 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 FAM237BA0A1B0GVD1 139 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 KBTBD13C9JR72 458 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 TBC1D12O60347 775 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 CALB1P05937 261 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 ABL2P42684 1182 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 YARSP54577 528 aaKnown RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 BACE1P56817 501 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 PTK7Q13308 1070 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 CRYMQ14894 314 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 LY6KQ17RY6 165 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 BSPRYQ5W0U4 402 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 ATP11CQ8NB49 1132 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 SERAC1Q96JX3 654 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 OSBPL1AQ9BXW6 950 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 IQCGQ9H095 443 aaKnown RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 R3HDMLQ9H3Y0 253 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 HACL1Q9UJ83 578 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 SMG5Q9UPR3 1016 aaKnown RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 GINS2Q9Y248 185 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 MAD1L1Q9Y6D9 718 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 CYB561D2O14569 222 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 TYROBPO43914 113 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 INHBAP08476 426 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 CCNB1P14635 433 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 CDH6P55285 790 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 TGFB2P61812 414 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 MUM1Q2TAK8 710 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 CAPRIN2Q6IMN6 1127 aaKnown RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 CLNKQ7Z7G1 428 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 PRPF39Q86UA1 669 aaKnown RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 TEPSINQ96N21 525 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 TSSK1BQ9BXA7 367 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 RNPEPL1Q9HAU8 725 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 RAB6BQ9NRW1 208 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 ZNF214Q9UL59 606 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 COL11A2P13942 1736 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 UGT1A9O60656 530 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 ASS1P00966 412 aaKnown RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 CXCL8P10145 99 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 PPP6R3Q5H9R7 873 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 FAM102AQ5T9C2 384 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 SLFN12LQ6IEE8 588 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 PIWIL1Q96J94 861 aaKnown RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 MIPEPQ99797 713 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 UGT1A7Q9HAW7 530 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 UGT1A10Q9HAW8 530 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 UGT1A8Q9HAW9 530 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 PCDH9Q9HC56 1237 aa14.72□□□□□ -0.05
COL6A1-207ENST00000612273 NGRNQ9NPE2 291 aaKnown RBP14.72□□□□□ -0.05
COL6A1-207ENST00000612273 GYG2O15488 501 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 DKC1O60832 514 aaKnown RBP eCLIP14.71□□□□□ -0.05
COL6A1-207ENST00000612273 PTDSS1P48651 473 aaKnown RBP14.71□□□□□ -0.05
COL6A1-207ENST00000612273 ARFIP2P53365 341 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 KDSRQ06136 332 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 ZCCHC23Q6ZST2 131 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 ALYREFQ86V81 257 aaKnown RBP14.71□□□□□ -0.05
COL6A1-207ENST00000612273 PPIL6Q8IXY8 311 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-207ENST00000612273 FAF2Q96CS3 445 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 TWNKQ96RR1 684 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 SHCBP1LQ9BZQ2 653 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 NIF3L1Q9GZT8 377 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.71□□□□□ -0.05
COL6A1-207ENST00000612273 ZNFX1Q9P2E3 1918 aaKnown RBP14.71□□□□□ -0.05
COL6A1-207ENST00000612273 KRT36O76013 467 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 HAUS5O94927 633 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 APRTP07741 180 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 ALADP13716 330 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 MIPP30301 263 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 PHBP35232 272 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 STAT5BP51692 787 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 CCNHP51946 323 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-207ENST00000612273 KPNB1Q14974 876 aaKnown RBP14.71□□□□□ -0.05
COL6A1-207ENST00000612273 DUOXA2Q1HG44 320 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 EEF1DP3Q658K8 133 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 MICALL2Q8IY33 904 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 PPP1R13LQ8WUF5 828 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 LRMDAQ9H2I8 198 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 AFG3L2Q9Y4W6 797 aa14.71□□□□□ -0.05
COL6A1-207ENST00000612273 MYL2P10916 166 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 CALB2P22676 271 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 NAMPTP43490 491 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 PIGHQ14442 188 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 RCN1Q15293 331 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 CDHR3Q6ZTQ4 885 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 NCAPG2Q86XI2 1143 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 RTKN2Q8IZC4 609 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 ZNF280CQ8ND82 737 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 ACAP3Q96P50 834 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 TMEM120AQ9BXJ8 343 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 TRIM55Q9BYV6 548 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 MAGEB5Q9BZ81 275 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 SMYD3Q9H7B4 428 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 KANSL3Q9P2N6 904 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms