RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 ANKRD49Q8WVL7 239 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 PSPC1Q8WXF1 523 aaKnown RBP11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZNF668Q96K58 619 aaPredicted RBP11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 C1orf74Q96LT6 269 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 TEPSINQ96N21 525 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 UROC1Q96N76 676 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 RPS6KC1Q96S38 1066 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 TBC1D22BQ9NU19 505 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 ANAPC5Q9UJX4 755 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 SCINQ9Y6U3 715 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 PEX10O60683 326 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 ATF2P15336 505 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 S100A5P33763 92 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 CRY1Q16526 586 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 PPP2R5EQ16537 467 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZBTB41Q5SVQ8 909 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 GRAMD2AQ8IUY3 354 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 STAMBPL1Q96FJ0 436 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 ASIC4Q96FT7 647 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 NOD2Q9HC29 1040 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 SEPT9Q9UHD8 586 aaPredicted RBP11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 C15orf41Q9Y2V0 281 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 RIPK3Q9Y572 518 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 KAT6AQ92794 2004 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 UMODL1Q5DID0 1318 aa11.23□□□□□ -0.61
PCDHGC3-202ENST00000611950 PFDN1O60925 122 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 CCNCP24863 283 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 STX2P32856 288 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZNF280AP59817 542 aaPredicted RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 PSMC5P62195 406 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 FASTKD3Q14CZ7 662 aaKnown RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 MTERF2Q49AM1 385 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ACAD10Q6JQN1 1059 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 TMEM270Q6UE05 265 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 TAOK1Q7L7X3 1001 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 RELL1Q8IUW5 271 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 LINC00469Q8N7U9 141 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 DDX1Q92499 740 aaKnown RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 LPAR1Q92633 364 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 TGS1Q96RS0 853 aaKnown RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 CCT7Q99832 543 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 KIAA1683Q9H0B3 1180 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ECT2Q9H8V3 914 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 PXMP2Q9NR77 195 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 PARP2Q9UGN5 583 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 PAPPA2Q9BXP8 1791 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 PTPRJQ12913 1337 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 TTC34A8MYJ7 566 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZNF862O60290 1169 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ATP6V1G2O95670 118 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 IFNB1P01574 187 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 MYO1EQ12965 1108 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 MTMR2Q13614 643 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 TCEAL1Q15170 157 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ARHGEF16Q5VV41 709 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 SWSAP1Q6NVH7 229 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 NEPROQ6NW34 567 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZNF365Q70YC5 407 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 PIGWQ7Z7B1 504 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 REM2Q8IYK8 340 aaPredicted RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 C4orf33Q8N1A6 199 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZNF296Q8WUU4 475 aaPredicted RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZFPM2Q8WW38 1151 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZNF516Q92618 1163 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 TMEM143Q96AN5 459 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 NINJ2Q9NZG7 142 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 SAE1Q9UBE0 346 aaPredicted RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 WDR64B1ANS9 1081 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 IGF2BP3O00425 579 aaKnown RBP eCLIP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 MAPK13O15264 365 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 TEX28O15482 410 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 SNX3O60493 162 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 MYBL1P10243 752 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 GZMAP12544 262 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 DSG3P32926 999 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 NSFP46459 744 aaKnown RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 DRG2P55039 364 aaKnown RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 DYNLT1P63172 113 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 FKBP1BP68106 108 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 PRKG1Q13976 671 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 CLEC16AQ2KHT3 1053 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 PRPF38BQ5VTL8 546 aaKnown RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 KRT77Q7Z794 578 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 ERICH1Q86X53 443 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 MAP4K3Q8IVH8 894 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 TMEM130Q8N3G9 435 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 USP6NLQ92738 828 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 SNF8Q96H20 258 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 C12orf65Q9H3J6 166 aaKnown RBP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 TMEM8AQ9HCN3 771 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 C1orf112Q9NSG2 853 aa11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.22□□□□□ -0.61
PCDHGC3-202ENST00000611950 PMM2O15305 246 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 NPTXRO95502 500 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 MYCP01106 439 aaPredicted RBP11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 PIK3CAP42336 1068 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 NLRP11P59045 1033 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms