RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 ITGB3P05106 788 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 ATP5BP06576 529 aaKnown RBP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 FAM163BP0C2L3 166 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 LINC00271P0C7V0 271 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 OAS2P29728 719 aaKnown RBP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 TEAD2Q15562 447 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 SGSM1Q2NKQ1 1148 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 CEP76Q8TAP6 659 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 SNX19Q92543 992 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 JAKMIP2Q96AA8 810 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 LENG9Q96B70 501 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 NCAPGQ9BPX3 1015 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 PCIF1Q9H4Z3 704 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 ARFGAP3Q9NP61 516 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 XPNPEP1Q9NQW7 623 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 TFIP11Q9UBB9 837 aaKnown RBP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 TIMM13Q9Y5L4 95 aaPredicted RBP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 A0A1W2PRU2 124 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 I3L4J1 428 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 FGFR3P22607 806 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 GPC5P78333 572 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 CUL4AQ13619 759 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 BRSK2Q8IWQ3 736 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 CNPY4Q8N129 248 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 MAB21L3Q8N8X9 362 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 SMG8Q8ND04 991 aaKnown RBP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 WHAMMQ8TF30 809 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 RABGGTAQ92696 567 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 MTMR9Q96QG7 549 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 REEP2Q9BRK0 252 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 DMAP1Q9NPF5 467 aaPredicted RBP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 GKN1Q9NS71 199 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 COMMD8Q9NX08 183 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 SRPRBQ9Y5M8 271 aaKnown RBP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 A0A087WWV3 80 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 AP5Z1O43299 807 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 DCNP07585 359 aaKnown RBP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 SYT1P21579 422 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 PSMC2P35998 433 aaKnown RBP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 AARSP49588 968 aaKnown RBP eCLIP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 C21orf59P57076 290 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 MCL1Q07820 350 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 WDR72Q3MJ13 1102 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 LOXL4Q96JB6 756 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 TMEM60Q9H2L4 133 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 ACBD3Q9H3P7 528 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 ARHGEF4Q9NR80 690 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 VPS45Q9NRW7 570 aa9.04□□□□□ -0.96
ZNF248-208ENST00000611278 APOBEC2Q9Y235 224 aaKnown RBP9.04□□□□□ -0.96
ZNF248-208ENST00000611278 PVALEFA0A1B0GWK0 134 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 NPC1O15118 1278 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 CCP110O43303 1012 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 ZNF217O75362 1048 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 GNA14O95837 355 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 F13A1P00488 732 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 NBL1P41271 181 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 ZNF75DP51815 510 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 GYS2P54840 703 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 CREB5Q02930 508 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 SLC35G1Q2M3R5 365 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 WDR49Q8IV35 697 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 ACBD6Q9BR61 282 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 EPC1Q9H2F5 836 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 FAM124BQ9H5Z6 455 aaPredicted RBP9.03□□□□□ -0.96
ZNF248-208ENST00000611278 CNTN3Q9P232 1028 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 PCDHGC5Q9Y5F6 944 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 PRUNE2Q8WUY3 3088 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 SLC11A2P49281 568 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 RAD51Q06609 339 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 RUNX3Q13761 415 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 C10orf120Q5SQS8 335 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 ARID3BQ8IVW6 561 aaPredicted RBP9.03□□□□□ -0.96
ZNF248-208ENST00000611278 CHPFQ8IZ52 775 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 PNMA5Q96PV4 448 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 DNAJC25Q9H1X3 360 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 AKAP7Q9P0M2 348 aaPredicted RBP9.03□□□□□ -0.96
ZNF248-208ENST00000611278 DNAI1Q9UI46 699 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 R4GN57 208 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 WDR27A2RRH5 827 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 SPATA1Q5VX52 437 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 LRRC69Q6ZNQ3 347 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 MAP4K3Q8IVH8 894 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 SMARCD1Q96GM5 515 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 HEXIM2Q96MH2 286 aaKnown RBP9.03□□□□□ -0.96
ZNF248-208ENST00000611278 PI4K2AQ9BTU6 479 aa9.03□□□□□ -0.96
ZNF248-208ENST00000611278 IPO11Q9UI26 975 aaKnown RBP9.03□□□□□ -0.96
ZNF248-208ENST00000611278 GOLGA8IPA6NC78 632 aa9.02□□□□□ -0.96
ZNF248-208ENST00000611278 GOLGA8JA6NMD2 632 aa9.02□□□□□ -0.96
ZNF248-208ENST00000611278 TULP2O00295 520 aa9.02□□□□□ -0.96
ZNF248-208ENST00000611278 MTF1Q14872 753 aa9.02□□□□□ -0.96
ZNF248-208ENST00000611278 ZNF528Q3MIS6 628 aa9.02□□□□□ -0.96
ZNF248-208ENST00000611278 SLC8B1Q6J4K2 584 aa9.02□□□□□ -0.96
ZNF248-208ENST00000611278 MYADMQ96S97 322 aa9.02□□□□□ -0.96
ZNF248-208ENST00000611278 NAT10Q9H0A0 1025 aaKnown RBP9.02□□□□□ -0.96
ZNF248-208ENST00000611278 ARHGAP28Q9P2N2 729 aa9.02□□□□□ -0.96
ZNF248-208ENST00000611278 TPX2Q9ULW0 747 aaKnown RBP9.02□□□□□ -0.96
ZNF248-208ENST00000611278 MYO7AQ13402 2215 aa9.02□□□□□ -0.97
ZNF248-208ENST00000611278 SLC38A8A6NNN8 435 aa9.02□□□□□ -0.97
ZNF248-208ENST00000611278 PNMA6AP0CW24 399 aaPredicted RBP9.02□□□□□ -0.97
ZNF248-208ENST00000611278 HTR4Q13639 388 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms