RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 HPDLQ96IR7 371 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 TK2O00142 265 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 RPS6KA4O75676 772 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 GSTM1P09488 218 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 ST13P50502 369 aaKnown RBP13.56□□□□□ -0.24
USP6NL-205ENST00000609104 ATF7IP2Q5U623 682 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 NMD3Q96D46 503 aaKnown RBP13.56□□□□□ -0.24
USP6NL-205ENST00000609104 DENND5BQ6ZUT9 1274 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 IGDCC4Q8TDY8 1250 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 ARHGEF5Q12774 1597 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 TMEM94Q12767 1356 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 SPHKAPQ2M3C7 1700 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 HMGCS2P54868 508 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 BLOC1S5Q8TDH9 187 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 ZNF333Q96JL9 665 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 MAGEB18Q96M61 343 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 HIST2H2ACQ16777 129 aaPredicted RBP13.56□□□□□ -0.24
USP6NL-205ENST00000609104 HIST2H2AA3Q6FI13 130 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 KLHL4Q9C0H6 718 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 H2AFYO75367 372 aaKnown RBP13.56□□□□□ -0.24
USP6NL-205ENST00000609104 KLRC1P26715 233 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 RRM2P31350 389 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 EXOSC10Q01780 885 aaKnown RBP13.56□□□□□ -0.24
USP6NL-205ENST00000609104 CYP4F12Q9HCS2 524 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 CNTN1Q12860 1018 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 TMED8Q6PL24 325 aaPredicted RBP13.56□□□□□ -0.24
USP6NL-205ENST00000609104 C4orf22Q6V702 233 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 PNKPQ96T60 521 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 THAP2Q9H0W7 228 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 PDP2Q9P2J9 529 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 KCNJ6P48051 423 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 BAATQ14032 418 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 NCF4Q15080 339 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 ARMCX4Q5H9R4 360 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 LINC00523Q86TU6 105 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 TLK2Q86UE8 772 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 EXTL3O43909 919 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 KCNMA1Q12791 1236 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 NEDD1Q8NHV4 660 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 HDHD2Q9H0R4 259 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 SNX13Q9Y5W8 968 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 HEATR9A2RTY3 570 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 APOA4P06727 396 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 RPS7P62081 194 aaKnown RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 COG2Q14746 738 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 KRCC1Q9NPI7 259 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 PLEKP08567 350 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 NUP62P37198 522 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 OTUD4Q01804 1114 aaKnown RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 CACHD1Q5VU97 1274 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 DENND1BQ6P3S1 775 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 VN1R5Q7Z5H4 357 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 FAM136AQ96C01 138 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 POU1F1P28069 291 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 SNX17Q15036 470 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 MYH10P35580 1976 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 ITGA4P13612 1032 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 ALOX15P16050 662 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 RGS2P41220 211 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 GLRBP48167 497 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 NAPEPLDQ6IQ20 393 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 ANKS1AQ92625 1134 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 EFCAB1Q9HAE3 211 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 NARFQ9UHQ1 456 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 THRAP10827 490 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 FAM84BQ96KN1 310 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 CINPQ9BW66 212 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 NAGPAQ9UK23 515 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 NR5A2O00482 541 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 ITGB3P05106 788 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 ALDH1A3P47895 512 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 EFHC1Q5JVL4 640 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 EFL1Q7Z2Z2 1120 aaKnown RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 SUGP1Q8IWZ8 645 aaKnown RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 IL1RAPL1Q9NZN1 696 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 KRR1Q13601 381 aaKnown RBP13.55□□□□□ -0.24
USP6NL-205ENST00000609104 C10orf120Q5SQS8 335 aa13.55□□□□□ -0.24
USP6NL-205ENST00000609104 EIF3DO15371 548 aaKnown RBP eCLIP13.54□□□□□ -0.24
USP6NL-205ENST00000609104 ATP6V1B2P21281 511 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 NMRK2Q9NPI5 230 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 PRR23AA6NEV1 266 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 EMC2Q15006 297 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 IER5Q5VY09 327 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 ERAP2Q6P179 960 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 MTMR4Q9NYA4 1195 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 TMEM253P0C7T8 217 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 BFSP2Q13515 415 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 NFIL3Q16649 462 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 ARMC6Q6NXE6 501 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 CNPY4Q8N129 248 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 COQ7Q99807 217 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 CHST12Q9NRB3 414 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 RPS6KL1Q9Y6S9 549 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 PDS5AQ29RF7 1337 aaKnown RBP13.54□□□□□ -0.24
USP6NL-205ENST00000609104 E9PBE3 544 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 FAM200BP0CF97 657 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 DDX39BQ13838 428 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms