RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CGRRF1Q99675 332 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 APOBEC3GQ9HC16 384 aaKnown RBP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 GPAMQ9HCL2 828 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 PCDHA10Q9Y5I2 948 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 IKBKGQ9Y6K9 419 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 SCN9AQ15858 1988 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 EIF4E1BA6NMX2 242 aaKnown RBP23.42■■□□□ 1.34
SHANK2-220ENST00000608988 NFIBO00712 420 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 TBC1D12O60347 775 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 PIGRP01833 764 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 KRT7P08729 469 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 BIRC2Q13490 618 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 TMEM35BQ8NCS4 154 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 ZNF606Q8WXB4 792 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 RSAD2Q8WXG1 361 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 PTPRN2Q92932 1015 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 FGD4Q96M96 766 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 C7orf26Q96N11 449 aa23.42■■□□□ 1.34
SHANK2-220ENST00000608988 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.41■■□□□ 1.34
SHANK2-220ENST00000608988 C3orf70A6NLC5 250 aaPredicted RBP23.41■■□□□ 1.34
SHANK2-220ENST00000608988 PLSCR1O15162 318 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 CIB2O75838 187 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 PGM5Q15124 567 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 DNAL1Q4LDG9 190 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 RAB3IL1Q8TBN0 382 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 MCEEQ96PE7 176 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 TRIM4Q9C037 500 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 PNPLA8Q9NP80 782 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 FBXO28Q9NVF7 368 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 IL1RAPL1Q9NZN1 696 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 AGO2Q9UKV8 859 aaKnown RBP23.41■■□□□ 1.34
SHANK2-220ENST00000608988 COL11A2P13942 1736 aaPredicted RBP23.41■■□□□ 1.34
SHANK2-220ENST00000608988 TCF4P15884 667 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 CDH5P33151 784 aaPredicted RBP23.41■■□□□ 1.34
SHANK2-220ENST00000608988 RPL22P35268 128 aaKnown RBP23.41■■□□□ 1.34
SHANK2-220ENST00000608988 AP3M2P53677 418 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 PTK7Q13308 1070 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 MSS51Q4VC12 460 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 SH2D5Q6ZV89 423 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 TAS1R3Q7RTX0 852 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 PRMT6Q96LA8 375 aaPredicted RBP23.41■■□□□ 1.34
SHANK2-220ENST00000608988 FRMD8Q9BZ67 464 aaPredicted RBP23.41■■□□□ 1.34
SHANK2-220ENST00000608988 PPME1Q9Y570 386 aa23.41■■□□□ 1.34
SHANK2-220ENST00000608988 F8VP50 259 aa23.4■■□□□ 1.34
SHANK2-220ENST00000608988 GOLGA8SH3BPF8 625 aa23.4■■□□□ 1.34
SHANK2-220ENST00000608988 GOLGA8MH3BSY2 632 aa23.4■■□□□ 1.34
SHANK2-220ENST00000608988 RTN3O95197 1032 aaPredicted RBP23.4■■□□□ 1.34
SHANK2-220ENST00000608988 SERPINB4P48594 390 aa23.4■■□□□ 1.34
SHANK2-220ENST00000608988 ZNF200P98182 395 aaPredicted RBP23.4■■□□□ 1.34
SHANK2-220ENST00000608988 OTUD4Q01804 1114 aaKnown RBP23.4■■□□□ 1.34
SHANK2-220ENST00000608988 PDCD2Q16342 344 aaPredicted RBP23.4■■□□□ 1.34
SHANK2-220ENST00000608988 ANKRD22Q5VYY1 191 aa23.4■■□□□ 1.34
SHANK2-220ENST00000608988 SPOPLQ6IQ16 392 aa23.4■■□□□ 1.34
SHANK2-220ENST00000608988 ACTL9Q8TC94 416 aa23.4■■□□□ 1.34
SHANK2-220ENST00000608988 WDR60Q8WVS4 1066 aa23.4■■□□□ 1.34
SHANK2-220ENST00000608988 WDR83Q9BRX9 315 aaKnown RBP23.4■■□□□ 1.34
SHANK2-220ENST00000608988 MKS1Q9NXB0 559 aa23.4■■□□□ 1.34
SHANK2-220ENST00000608988 AGTPBP1Q9UPW5 1226 aa23.4■■□□□ 1.34
SHANK2-220ENST00000608988 I3L4J1 428 aa23.39■■□□□ 1.34
SHANK2-220ENST00000608988 MAFGO15525 162 aa23.39■■□□□ 1.34
SHANK2-220ENST00000608988 STBD1O95210 358 aa23.39■■□□□ 1.34
SHANK2-220ENST00000608988 INHBAP08476 426 aa23.39■■□□□ 1.34
SHANK2-220ENST00000608988 ATG16L1Q676U5 607 aa23.39■■□□□ 1.34
SHANK2-220ENST00000608988 GBP5Q96PP8 586 aa23.39■■□□□ 1.34
SHANK2-220ENST00000608988 FBXO6Q9NRD1 293 aaPredicted RBP23.39■■□□□ 1.34
SHANK2-220ENST00000608988 KRT82Q9NSB4 513 aa23.39■■□□□ 1.34
SHANK2-220ENST00000608988 XPO7Q9UIA9 1087 aaKnown RBP23.39■■□□□ 1.34
SHANK2-220ENST00000608988 CAPN14A8MX76 684 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 ONECUT3O60422 494 aaPredicted RBP23.39■■□□□ 1.33
SHANK2-220ENST00000608988 BANF1O75531 89 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 MYL2P10916 166 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 THOC5Q13769 683 aaKnown RBP23.39■■□□□ 1.33
SHANK2-220ENST00000608988 HADHQ16836 314 aaKnown RBP23.39■■□□□ 1.33
SHANK2-220ENST00000608988 BBS9Q3SYG4 887 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 FAM182BQ5T319 152 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 ADGRG6Q86SQ4 1221 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 HAUS1Q96CS2 278 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 IMPG2Q9BZV3 1241 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 WWP1Q9H0M0 922 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 ARHGEF4Q9NR80 690 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 RBAKQ9NYW8 714 aaPredicted RBP23.39■■□□□ 1.33
SHANK2-220ENST00000608988 ZNF180Q9UJW8 692 aa23.39■■□□□ 1.33
SHANK2-220ENST00000608988 TM7SF2O76062 418 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 EIF4BP23588 611 aaKnown RBP23.38■■□□□ 1.33
SHANK2-220ENST00000608988 SH3BGRP55822 239 aaPredicted RBP23.38■■□□□ 1.33
SHANK2-220ENST00000608988 AP2B1P63010 937 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 OGDHQ02218 1023 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 RNF220Q5VTB9 566 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 MYLK4Q86YV6 388 aaPredicted RBP23.38■■□□□ 1.33
SHANK2-220ENST00000608988 NLGN1Q8N2Q7 840 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 FNIP1Q8TF40 1166 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 GPRASP2Q96D09 838 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 C1orf21Q9H246 121 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 PCDHGC3Q9UN70 934 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 SORCS3Q9UPU3 1222 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 NUB1Q9Y5A7 615 aa23.38■■□□□ 1.33
SHANK2-220ENST00000608988 EIF2AK2P19525 551 aaKnown RBP23.37■■□□□ 1.33
SHANK2-220ENST00000608988 BGNP21810 368 aa23.37■■□□□ 1.33
SHANK2-220ENST00000608988 NLRP11P59045 1033 aaKnown RBP23.37■■□□□ 1.33
SHANK2-220ENST00000608988 TMCO4Q5TGY1 634 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms