RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 DOCK8Q8NF50 2099 aa12.97□□□□□ -0.33
LINC00963-212ENST00000608669 SLC38A8A6NNN8 435 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 P4HA2O15460 535 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 XYLBO75191 536 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 HNRNPA1P09651 372 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00963-212ENST00000608669 FSHRP23945 695 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 GABRR2P28476 465 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 MTHFRP42898 656 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 EPHB3P54753 998 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 ZP2Q05996 745 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 TEAD2Q15562 447 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 NFE2Q16621 373 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-212ENST00000608669 AAK1Q2M2I8 961 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 ELMSAN1Q6PJG2 1045 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 C4orf50Q6ZRC1 276 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 DNAJB7Q7Z6W7 309 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-212ENST00000608669 TTC16Q8NEE8 873 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 ZMIZ2Q8NF64 920 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 CMASQ8NFW8 434 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-212ENST00000608669 SCAMP5Q8TAC9 235 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 SHKBP1Q8TBC3 707 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 UBA3Q8TBC4 463 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 RSAD2Q8WXG1 361 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00963-212ENST00000608669 MCRS1Q96EZ8 462 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 CYFIP2Q96F07 1278 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 TMEM176AQ96HP8 235 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 TNIP3Q96KP6 325 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 ZSWIM3Q96MP5 696 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 SMOQ99835 787 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 OXCT2Q9BYC2 517 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-212ENST00000608669 SMG9Q9H0W8 520 aaKnown RBP12.96□□□□□ -0.33
LINC00963-212ENST00000608669 WDR6Q9NNW5 1121 aaKnown RBP12.96□□□□□ -0.33
LINC00963-212ENST00000608669 NLRC4Q9NPP4 1024 aa12.96□□□□□ -0.33
LINC00963-212ENST00000608669 NCANO14594 1321 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 ZNF638Q14966 1978 aaKnown RBP12.95□□□□□ -0.34
LINC00963-212ENST00000608669 SMTNL1A8MU46 457 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 PMM2O15305 246 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 MOSPD3O75425 235 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 TADA3O75528 432 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 NOL4O94818 638 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 TBXAS1P24557 533 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-212ENST00000608669 PGFP49763 221 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 TAF12Q16514 161 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 PRSS36Q5K4E3 855 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 PDZD4Q76G19 769 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-212ENST00000608669 UNC93AQ86WB7 457 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 TTC30AQ86WT1 665 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 PASD1Q8IV76 773 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 ELMOD1Q8N336 334 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 SPATA18Q8TC71 538 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 HDAC7Q8WUI4 952 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 ZNF512Q96ME7 567 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-212ENST00000608669 UHRF1Q96T88 793 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-212ENST00000608669 LRRC3Q9BY71 257 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 GPR88Q9GZN0 384 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 GANQ9H2C0 597 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 PLCB1Q9NQ66 1216 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 ASAH2Q9NR71 780 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 DPP7Q9UHL4 492 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 SIK3Q9Y2K2 1263 aa12.95□□□□□ -0.34
LINC00963-212ENST00000608669 MRPS23Q9Y3D9 190 aaKnown RBP12.95□□□□□ -0.34
LINC00963-212ENST00000608669 GOLGA6L19H0YKK7 550 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 CYP26A1O43174 497 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 SERPINC1P01008 464 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 TPM2P07951 284 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 HMGA1P17096 107 aaKnown RBP12.94□□□□□ -0.34
LINC00963-212ENST00000608669 PTPN2P17706 415 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 ANXA13P27216 316 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 HOXA9P31269 272 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 RGS7P49802 495 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 POLR2FP61218 127 aaKnown RBP12.94□□□□□ -0.34
LINC00963-212ENST00000608669 FANCCQ00597 558 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 VEPH1Q14D04 833 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 UVSSAQ2YD98 709 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 CFAP221Q4G0U5 840 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 FKBP15Q5T1M5 1219 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 KLHDC7AQ5VTJ3 777 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 CLEC20AQ6ZU45 233 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 GAREM2Q75VX8 874 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 GAS2L3Q86XJ1 694 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 NPAS3Q8IXF0 933 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 CRYBG2Q8N1P7 616 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 TDRD5Q8NAT2 981 aaKnown RBP12.94□□□□□ -0.34
LINC00963-212ENST00000608669 ANKRD20A12PQ8NF67 263 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 NDRG1Q92597 394 aaKnown RBP12.94□□□□□ -0.34
LINC00963-212ENST00000608669 FGF13Q92913 245 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 PSMG2Q969U7 264 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 SMARCD1Q96GM5 515 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 KXD1Q9BQD3 176 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 RPP25Q9BUL9 199 aaKnown RBP12.94□□□□□ -0.34
LINC00963-212ENST00000608669 PHF7Q9BWX1 381 aaPredicted RBP12.94□□□□□ -0.34
LINC00963-212ENST00000608669 ATXN3LQ9H3M9 355 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 SLITRK6Q9H5Y7 841 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 IL21Q9HBE4 155 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 LIMD1Q9UGP4 676 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 TSPAN16Q9UKR8 245 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 DENND4CQ5VZ89 1909 aa12.94□□□□□ -0.34
LINC00963-212ENST00000608669 GTPBP10A4D1E9 387 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms