RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TAF2Q6P1X5 1199 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 IYDQ6PHW0 289 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 SLC2A7Q6PXP3 512 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 GRAMD2AQ8IUY3 354 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 BCAS4Q8TDM0 211 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 NDNQ99608 321 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 EHD1Q9H4M9 534 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 MROH8Q9H579 483 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 PARVGQ9HBI0 331 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 VCX3AQ9NNX9 186 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 LATS2Q9NRM7 1088 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 HMG20BQ9P0W2 317 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 ACTR3BQ9P1U1 418 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 TBC1D14Q9P2M4 693 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 RAB21Q9UL25 225 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 L1RE1Q9UN81 338 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 PCDHB12Q9Y5F1 795 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 HRH3Q9Y5N1 445 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 SOS2Q07890 1332 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 PAPPAQ13219 1627 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 FMN2Q9NZ56 1722 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 LGALS16A8MUM7 142 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 GPR25O00155 361 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 TEX28O15482 410 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 ALDH2P05091 517 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 BPIP17213 487 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 CPA2P48052 419 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 SEC24CP53992 1094 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 FAM189BP81408 668 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 MYO1EQ12965 1108 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 PLD1Q13393 1074 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 HSF5Q4G112 596 aaPredicted RBP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 SLC9C2Q5TAH2 1124 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 OTUD7BQ6GQQ9 843 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 ABHD17CQ6PCB6 329 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 C11orf88Q6PI97 169 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 CEP128Q6ZU80 1094 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 SRGAP1Q7Z6B7 1085 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 CABP7Q86V35 215 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 FAM160B2Q86V87 743 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 HID1Q8IV36 788 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 BANPQ8N9N5 519 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 NCLNQ969V3 563 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 TMIGD2Q96BF3 282 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 TUBGCP3Q96CW5 907 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 NRBF2Q96F24 287 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 OSBPL1AQ9BXW6 950 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 VPS16Q9H269 839 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 NCOR1P1Q9H4R4 102 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 CNTD2Q9H8S5 307 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 EMC7Q9NPA0 242 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 MIS18AQ9NYP9 233 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 NINJ2Q9NZG7 142 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 SRP68Q9UHB9 627 aaKnown RBP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 TEKT2Q9UIF3 430 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 CCPG1Q9ULG6 757 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 GRID1Q9ULK0 1009 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNRF3Q9ULT6 936 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 DDX19BQ9UMR2 479 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 PCDHB2Q9Y5E7 798 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 ATP23Q9Y6H3 246 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 NSD2O96028 1365 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 POM121BA6NF01 834 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 RHPN2P1A8MT19 583 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 SUSD5O60279 629 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 N4BP1O75113 896 aaKnown RBP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 ZC3H11AO75152 810 aaKnown RBP eCLIP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 PTP4A3O75365 173 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 PAGE1O75459 146 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 PALMO75781 387 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 HOXA11P31270 313 aaPredicted RBP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 ETV1P50549 477 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 FCGRTP55899 365 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 ETF1P62495 437 aaKnown RBP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 FOXK2Q01167 660 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 RUNX1T1Q06455 604 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 RIPK1Q13546 671 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 PFKFB4Q16877 469 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 SUPT20HL1Q3ZLR7 823 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 SLC44A4Q53GD3 710 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 MDH1BQ5I0G3 518 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 FYB2Q5VWT5 728 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 DRICH1Q6PGQ1 229 aaPredicted RBP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 VHLLQ6RSH7 139 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 LSMEM2Q8N112 164 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 VWA5B2Q8N398 1253 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 SUPT20HQ8NEM7 779 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 TOR1AIP2Q8NFQ8 470 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 CDC26Q8NHZ8 85 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 OTUD7AQ8TE49 926 aaPredicted RBP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF570Q96NI8 536 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 KCNC2Q96PR1 638 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 TUBA1CQ9BQE3 449 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 FTOQ9C0B1 505 aaKnown RBP eCLIP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 DNAJC18Q9H819 358 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 INIPQ9NRY2 104 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 INTS7Q9NVH2 962 aaKnown RBP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 FKBP14Q9NWM8 211 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 NMRK1Q9NWW6 199 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 IL20Q9NYY1 176 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms