RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 ADAM15Q13444 863 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 DRAP1Q14919 205 aaPredicted RBP10.7□□□□□ -0.7
UPF1-213ENST00000601981 SLC18A3Q16572 532 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 CCDC122Q5T0U0 273 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 C10orf76Q5T2E6 689 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 SCARA3Q6AZY7 606 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 PHLDB3Q6NSJ2 640 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 TMEM184AQ6ZMB5 413 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 VPS36Q86VN1 386 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 SPATA2LQ8IUW3 424 aaPredicted RBP10.7□□□□□ -0.7
UPF1-213ENST00000601981 ARHGEF19Q8IW93 802 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 KREMEN2Q8NCW0 462 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 OR10T2Q8NGX3 314 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 SLC22A17Q8WUG5 538 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 ATRIPQ8WXE1 791 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 HLA-CQ95604 372 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 MRPL45Q9BRJ2 306 aaKnown RBP10.7□□□□□ -0.7
UPF1-213ENST00000601981 NT5C1AQ9BXI3 368 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 GPR88Q9GZN0 384 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 MAN1C1Q9NR34 630 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 HSFX1Q9UBD0 423 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 FBXW11Q9UKB1 542 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 PCDHB5Q9Y5E4 795 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 PCDHA13Q9Y5I0 950 aa10.7□□□□□ -0.7
UPF1-213ENST00000601981 RIOK3O14730 519 aaKnown RBP10.69□□□□□ -0.7
UPF1-213ENST00000601981 XYLBO75191 536 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 CILPO75339 1184 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 ABLIM3O94929 683 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 LRG1P02750 347 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 C8AP07357 584 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 OR4Q2P0C623 313 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 EPCAMP16422 314 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 ACAT1P24752 427 aaKnown RBP10.69□□□□□ -0.7
UPF1-213ENST00000601981 GTF2F1P35269 517 aaKnown RBP eCLIP10.69□□□□□ -0.75e-6■■□□□ 13.8
UPF1-213ENST00000601981 MAGEA1P43355 309 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 TUFMP49411 452 aaKnown RBP10.69□□□□□ -0.7
UPF1-213ENST00000601981 NDST1P52848 882 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 CDH8P55286 799 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 CYP27A1Q02318 531 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 ARID5AQ03989 594 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 PTK2Q05397 1052 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 ADCY1Q08828 1119 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 AAK1Q2M2I8 961 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 PPM1LQ5SGD2 360 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 CES5AQ6NT32 575 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 LILRA6Q6PI73 481 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 RSPO2Q6UXX9 243 aaPredicted RBP10.69□□□□□ -0.7
UPF1-213ENST00000601981 RNF19BQ6ZMZ0 732 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 ZNF571Q7Z3V5 609 aaPredicted RBP10.69□□□□□ -0.7
UPF1-213ENST00000601981 OSTM1Q86WC4 334 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 TCEAL8Q8IYN2 117 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 ELMOD1Q8N336 334 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 B3GALNT2Q8NCR0 500 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 TATDN2Q93075 761 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 FUBP3Q96I24 572 aaKnown RBP eCLIP10.69□□□□□ -0.7
UPF1-213ENST00000601981 WDR24Q96S15 920 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 RTP3Q9BQQ7 232 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 UBE2ZQ9H832 354 aaPredicted RBP10.69□□□□□ -0.7
UPF1-213ENST00000601981 L2HGDHQ9H9P8 463 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 CYP4F11Q9HBI6 524 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 ABCB6Q9NP58 842 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 UBE2TQ9NPD8 197 aaPredicted RBP10.69□□□□□ -0.7
UPF1-213ENST00000601981 CISHQ9NSE2 258 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 ZDHHC7Q9NXF8 308 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 ABI2Q9NYB9 513 aaPredicted RBP10.69□□□□□ -0.7
UPF1-213ENST00000601981 NENFQ9UMX5 172 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 FAM50BQ9Y247 325 aa10.69□□□□□ -0.7
UPF1-213ENST00000601981 C2orf16Q68DN1 1984 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 MTMR11A4FU01 709 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 RCCD1A6NED2 376 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 FANCGO15287 622 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 ADAM12O43184 909 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 ZMYND10O75800 440 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 HNRNPA1P09651 372 aaKnown RBP eCLIP10.68□□□□□ -0.7
UPF1-213ENST00000601981 PTPN1P18031 435 aaKnown RBP10.68□□□□□ -0.7
UPF1-213ENST00000601981 LMO2P25791 158 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 HOXA9P31269 272 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 ALDH1A3P47895 512 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 PSMC1P62191 440 aaKnown RBP10.68□□□□□ -0.7
UPF1-213ENST00000601981 ITIH3Q06033 890 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 GFPT1Q06210 699 aaPredicted RBP10.68□□□□□ -0.7
UPF1-213ENST00000601981 KCNC3Q14003 757 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 COL19A1Q14993 1142 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 VEPH1Q14D04 833 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 ARHGAP44Q17R89 818 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 CTC1Q2NKJ3 1217 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 PUS10Q3MIT2 529 aaKnown RBP10.68□□□□□ -0.7
UPF1-213ENST00000601981 MGAT5BQ3V5L5 792 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 MDH1BQ5I0G3 518 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 ZNF569Q5MCW4 686 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 ANKRD54Q6NXT1 300 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 GPIHBP1Q8IV16 184 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 SLC35F6Q8N357 371 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 SLC7A14Q8TBB6 771 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 MYCBPAPQ8TBZ2 947 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 SHC3Q92529 594 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 ELMO3Q96BJ8 720 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 TMEM176AQ96HP8 235 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 PGLYRP2Q96PD5 576 aa10.68□□□□□ -0.7
UPF1-213ENST00000601981 SYT11Q9BT88 431 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms