RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 MED19A0JLT2 244 aaPredicted RBP18.17■□□□□ 0.5
SCAF1-204ENST00000601038 POLR2DO15514 142 aaKnown RBP18.17■□□□□ 0.5
SCAF1-204ENST00000601038 LRP3O75074 770 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 ATG13O75143 517 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 CST3P01034 146 aaPredicted RBP18.17■□□□□ 0.5
SCAF1-204ENST00000601038 PDGFRBP09619 1106 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 FAM163BP0C2L3 166 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 DLATP10515 647 aaKnown RBP18.17■□□□□ 0.5
SCAF1-204ENST00000601038 ARSAP15289 507 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 TNNI1P19237 187 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 PSMC1P62191 440 aaKnown RBP18.17■□□□□ 0.5
SCAF1-204ENST00000601038 CYP24A1Q07973 514 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 SPEM2Q0P670 501 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 MTF1Q14872 753 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 PSMD6Q15008 389 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 FOXD4L5Q5VV16 416 aaPredicted RBP18.17■□□□□ 0.5
SCAF1-204ENST00000601038 XXYLT1Q8NBI6 393 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 FOXD4L4Q8WXT5 416 aaPredicted RBP18.17■□□□□ 0.5
SCAF1-204ENST00000601038 SLC22A12Q96S37 553 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 TRPC7Q9HCX4 862 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 PARD6AQ9NPB6 346 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 GCNT4Q9P109 453 aa18.17■□□□□ 0.5
SCAF1-204ENST00000601038 PVALEFA0A1B0GWK0 134 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 CLIC2O15247 247 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 CKMP06732 381 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 ZSCAN22P10073 491 aaPredicted RBP18.16■□□□□ 0.5
SCAF1-204ENST00000601038 BDNFP23560 247 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 GNL1P36915 607 aaPredicted RBP18.16■□□□□ 0.5
SCAF1-204ENST00000601038 GRIK1P39086 918 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 CYP2J2P51589 502 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 SRSF5Q13243 272 aaKnown RBP18.16■□□□□ 0.5
SCAF1-204ENST00000601038 ZNF77Q15935 545 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 HS2ST1Q7LGA3 356 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 WDR5BQ86VZ2 330 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 NELFCDQ8IXH7 590 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 ARL14EPQ8N8R7 260 aaPredicted RBP18.16■□□□□ 0.5
SCAF1-204ENST00000601038 MYCBPAPQ8TBZ2 947 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 OSCP1Q8WVF1 389 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 MYLPFQ96A32 169 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 CGRRF1Q99675 332 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 DUS2Q9NX74 493 aaKnown RBP18.16■□□□□ 0.5
SCAF1-204ENST00000601038 FAM13BQ9NYF5 915 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 CGNQ9P2M7 1197 aaKnown RBP18.16■□□□□ 0.5
SCAF1-204ENST00000601038 PCDHA7Q9UN72 937 aa18.16■□□□□ 0.5
SCAF1-204ENST00000601038 CACNA1AO00555 2505 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 C2orf78A6NCI8 922 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 TACC1O75410 805 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 F13A1P00488 732 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 TCF3P15923 654 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 PFKLP17858 780 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 HDCP19113 662 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 DRD1P21728 446 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 GJA4P35212 333 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 PDE6CP51160 858 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 GALK1P51570 392 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 ATXN1P54253 815 aaKnown RBP18.15■□□□□ 0.5
SCAF1-204ENST00000601038 CYP27A1Q02318 531 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 USP4Q13107 963 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 BMT2Q1RMZ1 405 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 ATL3Q6DD88 541 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 PKN3Q6P5Z2 889 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 DENND5BQ6ZUT9 1274 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 C12orf56Q8IXR9 622 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 CPA6Q8N4T0 437 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 EXOC4Q96A65 974 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 CCDC127Q96BQ5 260 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 PCED1BQ96HM7 432 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 P2RY13Q9BPV8 354 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 MRPL45Q9BRJ2 306 aaKnown RBP18.15■□□□□ 0.5
SCAF1-204ENST00000601038 BLZF1Q9H2G9 400 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 SNX25Q9H3E2 840 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 ECT2Q9H8V3 914 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 FBRSL1Q9HCM7 1045 aaKnown RBP18.15■□□□□ 0.5
SCAF1-204ENST00000601038 EHD2Q9NZN4 543 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 CDV3Q9UKY7 258 aaKnown RBP18.15■□□□□ 0.5
SCAF1-204ENST00000601038 DMXL1Q9Y485 3027 aa18.15■□□□□ 0.5
SCAF1-204ENST00000601038 GREB1Q4ZG55 1949 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 ANAPC1Q9H1A4 1944 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 CCDC163A0A0D9SF12 145 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 TRIM66O15016 1216 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 EGFP01133 1207 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 ANXA13P27216 316 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 CASP1P29466 404 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 HOXC13P31276 330 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 ME1P48163 572 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 KCNB1Q14721 858 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 KNOP1Q1ED39 458 aaKnown RBP18.14■□□□□ 0.49
SCAF1-204ENST00000601038 WDR72Q3MJ13 1102 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 FOXD4L6Q3SYB3 417 aaPredicted RBP18.14■□□□□ 0.49
SCAF1-204ENST00000601038 FBXO43Q4G163 708 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 RESP18Q5W5W9 173 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 FOXD4L3Q6VB84 417 aaPredicted RBP18.14■□□□□ 0.49
SCAF1-204ENST00000601038 CEP68Q76N32 757 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.14■□□□□ 0.49
SCAF1-204ENST00000601038 OR6B3Q8NGW1 331 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 SH3RF2Q8TEC5 729 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 ZNF516Q92618 1163 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 ATP2A3Q93084 1043 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 RTKNQ9BST9 563 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 SLC39A2Q9NP94 309 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms