RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 MROH8Q9H579 483 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 PDZD7Q9H5P4 517 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 TSPAN16Q9UKR8 245 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 BHMG1C9JSJ3 638 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 KLF1Q13351 362 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 TCEAL1Q15170 157 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 GOLGA7BQ2TAP0 167 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 C12orf50Q8NA57 414 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 SLC4A11Q8NBS3 891 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 SPATA18Q8TC71 538 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 PGM2Q96G03 612 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 SYT17Q9BSW7 474 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 C12orf65Q9H3J6 166 aaKnown RBP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 GOLGA2P5Q9HBQ8 144 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 CACNG4Q9UBN1 327 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 CPA4Q9UI42 421 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 hCG_1818297A0A087WSY0 165 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 TP73O15350 636 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 RBP3P10745 1247 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 LCP1P13796 627 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 PEX19P40855 299 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 CTCFP49711 727 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 EIF3EP60228 445 aaKnown RBP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 LAMC2Q13753 1193 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 EFTUD2Q15029 972 aaKnown RBP eCLIP12.11□□□□□ -0.474e-7■■■■□ 24.2
ARHGEF1-220ENST00000600274 GRIK4Q16099 956 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 ERMARDQ5T6L9 678 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 CDCA2Q69YH5 1023 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 ANKS4BQ8N8V4 417 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 TNFSF13BQ9Y275 285 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 NR2E3Q9Y5X4 410 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 LOXHD1Q8IVV2 1947 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 BTBD19C9JJ37 291 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 NEBLO76041 1014 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 P4HA1P13674 534 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 CDC25CP30307 473 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 ZNF132P52740 706 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 MYO1EQ12965 1108 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 ANKRD22Q5VYY1 191 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 RXFP2Q8WXD0 754 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 FAM149B1Q96BN6 582 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 ADAM7Q9H2U9 754 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 CDHR5Q9HBB8 845 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 STRIP2Q9ULQ0 834 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 CHMP2BQ9UQN3 213 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 KAT6AQ92794 2004 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 ABLIM1O14639 778 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 PRPSAP2O60256 369 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 SKAP2O75563 359 aaPredicted RBP12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 ITGBL1O95965 494 aaPredicted RBP12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 DRD4P21917 467 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 MMP13P45452 471 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 UNC45BQ8IWX7 931 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 PALM2Q8IXS6 379 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 RNF169Q8NCN4 708 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 PYROXD1Q8WU10 500 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 LBHD1Q9BQE6 289 aaPredicted RBP12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 EIF2AQ9BY44 585 aaKnown RBP12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 TUBGCP4Q9UGJ1 667 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 TPX2Q9ULW0 747 aaKnown RBP12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 USP18Q9UMW8 372 aa12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 PIN4Q9Y237 131 aaKnown RBP12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 MRPL42Q9Y6G3 142 aaKnown RBP12.1□□□□□ -0.47
ARHGEF1-220ENST00000600274 LSM8O95777 96 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 EIF4BP23588 611 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 CDKN2BP42772 138 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 RABGGTBP53611 331 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 VCPP55072 806 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 YWHAGP61981 247 aaKnown RBP eCLIP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 ZNF200P98182 395 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 CNGA2Q16280 664 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 CCDC142Q17RM4 750 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 ZC3H12AQ5D1E8 599 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 ILDR2Q71H61 639 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 CTAGE3PQ8IX95 158 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 MAGEB5Q9BZ81 275 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 SLC40A1Q9NP59 571 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 MAGED2Q9UNF1 606 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 A8MXQ7 604 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 MCF2LO15068 1137 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 B4GALT4O60513 344 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 LGR5O75473 907 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 CA4P22748 312 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 ATXN1P54253 815 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 BEX3Q00994 111 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 MPP2Q14168 576 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 SNCBQ16143 134 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 SPOCK2Q92563 424 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 NDRG1Q92597 394 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 TGS1Q96RS0 853 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 MRPL45Q9BRJ2 306 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 NXF3Q9H4D5 531 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 PIH1D1Q9NWS0 290 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 TCRBV7S3A2A0A539 114 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 PKN2Q16513 984 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms