RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 NDEL1Q9GZM8 345 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 NCAPD2Q15021 1401 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 CFAP99D6REC4 459 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 RPS6KA5O75582 802 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 FDX1P10109 184 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 PSMC3P17980 439 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 POU1F1P28069 291 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 HIST2H2ACQ16777 129 aaPredicted RBP12.27□□□□□ -0.44
SCN8A-208ENST00000599343 SEZ6Q53EL9 994 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 HIST2H2AA3Q6FI13 130 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 TRIM65Q6PJ69 517 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 KRT78Q8N1N4 520 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 STKLD1Q8NE28 680 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 L3MBTL3Q96JM7 780 aaPredicted RBP12.27□□□□□ -0.44
SCN8A-208ENST00000599343 DNAJC7Q99615 494 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 TRIM8Q9BZR9 551 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 PIF1Q9H611 641 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 SENP2Q9HC62 589 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 SOX6P35712 828 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 TRIM71Q2Q1W2 868 aaKnown RBP12.27□□□□□ -0.45
SCN8A-208ENST00000599343 EFCAB12Q6NXP0 572 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 DENND1BQ6P3S1 775 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 SMIM5Q71RC9 77 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 ATG9AQ7Z3C6 839 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 SLC13A5Q86YT5 568 aaPredicted RBP12.27□□□□□ -0.45
SCN8A-208ENST00000599343 SEPT1Q8WYJ6 367 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 HIC2Q96JB3 615 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 NIF3L1Q9GZT8 377 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 ITGB3P05106 788 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 ATP6V1B2P21281 511 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 STX5Q13190 355 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 EDRF1Q3B7T1 1238 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 CACHD1Q5VU97 1274 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 KDM7AQ6ZMT4 941 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 ANKRD49Q8WVL7 239 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 HPDLQ96IR7 371 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 PPP1R2P1Q96PQ5 205 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 ISCA1Q9BUE6 129 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 KRT84Q9NSB2 600 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 C6orf222P0C671 652 aaPredicted RBP12.27□□□□□ -0.45
SCN8A-208ENST00000599343 OTUD4Q01804 1114 aaKnown RBP12.27□□□□□ -0.45
SCN8A-208ENST00000599343 COG2Q14746 738 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 EFHC1Q5JVL4 640 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 ERAP2Q6P179 960 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 OR8H2Q8N162 312 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 NMRK2Q9NPI5 230 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 FAM153AQ9UHL3 310 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 DAGLAQ9Y4D2 1042 aa12.27□□□□□ -0.45
SCN8A-208ENST00000599343 SGPL1O95470 568 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 EPHB2P29323 1055 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 HARS2P49590 506 aaKnown RBP12.26□□□□□ -0.45
SCN8A-208ENST00000599343 TSGA10IPQ3SY00 556 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 SCUBE1Q8IWY4 988 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 NMD3Q96D46 503 aaKnown RBP12.26□□□□□ -0.45
SCN8A-208ENST00000599343 TUBE1Q9UJT0 475 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 PLEKHG2Q9H7P9 1386 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 NR5A2O00482 541 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 CPSF4O95639 269 aaKnown RBP12.26□□□□□ -0.45
SCN8A-208ENST00000599343 OASLQ15646 514 aaKnown RBP12.26□□□□□ -0.45
SCN8A-208ENST00000599343 MFSD4BQ5TF39 518 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 ACAD10Q6JQN1 1059 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 ARMC6Q6NXE6 501 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 IARS2Q9NSE4 1012 aaKnown RBP12.26□□□□□ -0.45
SCN8A-208ENST00000599343 RPS6KL1Q9Y6S9 549 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 EIF3DO15371 548 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCN8A-208ENST00000599343 GLRA3O75311 464 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 GH1P01241 217 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 SARSP49591 514 aaKnown RBP12.26□□□□□ -0.45
SCN8A-208ENST00000599343 AGAP9Q5VTM2 703 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 CLEC17AQ6ZS10 378 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 RAET1EQ8TD07 263 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 MRGBPQ9NV56 204 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 M0QYT0 321 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 SMAPO00193 183 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 STX7O15400 261 aaKnown RBP12.26□□□□□ -0.45
SCN8A-208ENST00000599343 NR3C2P08235 984 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 KCNT1Q5JUK3 1230 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 ZNF614Q8N883 585 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 MAGEB18Q96M61 343 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 MOV10L1Q9BXT6 1211 aaKnown RBP12.26□□□□□ -0.45
SCN8A-208ENST00000599343 CHST12Q9NRB3 414 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 PRR12Q9ULL5 1215 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 CDC42BPGQ6DT37 1551 aa12.26□□□□□ -0.45
SCN8A-208ENST00000599343 PRR23AA6NEV1 266 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 HSMCR30P0CW71 290 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 SCTRP47872 440 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 KCNMA1Q12791 1236 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 CNTN1Q12860 1018 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 NFYCQ13952 458 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 KBTBD12Q3ZCT8 623 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 BNC2Q6ZN30 1099 aaPredicted RBP12.25□□□□□ -0.45
SCN8A-208ENST00000599343 LRRC8DQ7L1W4 858 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 ZNF333Q96JL9 665 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 ZSWIM1Q9BR11 485 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 ROGDIQ9GZN7 287 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 KCND2Q9NZV8 630 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 DNAJC16Q9Y2G8 782 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 AP4S1Q9Y587 144 aa12.25□□□□□ -0.45
SCN8A-208ENST00000599343 SESN1Q9Y6P5 492 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms