RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 LAMP2P13473 410 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 ADORA2BP29275 332 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 GBP2P32456 591 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 SSTR3P32745 418 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 GRIK1P39086 918 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 ZNF165P49910 485 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 RPL10AP62906 217 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 CETN1Q12798 172 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 PLD1Q13393 1074 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 EXOC3L4Q17RC7 722 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 STXBP5Q5T5C0 1151 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 PPP1R26Q5T8A7 1209 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 IQCEQ6IPM2 695 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 VSTM1Q6UX27 236 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 GBP6Q6ZN66 633 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 ZDHHC14Q8IZN3 488 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 FAM200AQ8TCP9 573 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 RSAD2Q8WXG1 361 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 CYFIP2Q96F07 1278 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 C8orf48Q96LL4 319 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 HEXIM2Q96MH2 286 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 HNRNPABQ99729 332 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 RPP25Q9BUL9 199 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 CBX8Q9HC52 389 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 UBE2TQ9NPD8 197 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 CDH7Q9ULB5 785 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 ASB3Q9Y575 518 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 C2orf16Q68DN1 1984 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 NOTCH4Q99466 2003 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 A0A1W2PRU2 124 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 GTPBP10A4D1E9 387 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 LRRC10BA6NIK2 292 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 TADA3O75528 432 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 NOL4O94818 638 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 KLK7P49862 253 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 COPB1P53618 953 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 GCNT1Q02742 428 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 TEAD2Q15562 447 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 PDZD4Q76G19 769 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 OTOP3Q7RTS5 596 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 GPIHBP1Q8IV16 184 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 ELMOD1Q8N336 334 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 TDRD5Q8NAT2 981 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 TFAP2BQ92481 460 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 SPATA17Q96L03 361 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 MED10Q9BTT4 135 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 SMOC2Q9H3U7 446 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 ASAH2Q9NR71 780 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 EPS15L1Q9UBC2 864 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 MAGED2Q9UNF1 606 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 NR2E1Q9Y466 385 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 PCDHB4Q9Y5E5 795 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 DOCK6Q96HP0 2047 aa15.09■□□□□ 0.01
SHKBP1-217ENST00000598558 BECN2A8MW95 431 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 HHLA1C9JL84 531 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 TNFRSF10BO14763 440 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 AP1G2O75843 785 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 TBXAS1P24557 533 aaPredicted RBP15.08■□□□□ 0
SHKBP1-217ENST00000598558 GABRR2P28476 465 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 ZNF132P52740 706 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 CYP4F8P98187 520 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 CYP4A22Q5TCH4 519 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 TMEM270Q6UE05 265 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 PARM1Q6UWI2 310 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 ITIH5Q86UX2 942 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 LUZP1Q86V48 1076 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 CSNK1G1Q9HCP0 422 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 ACP6Q9NPH0 428 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 KRT82Q9NSB4 513 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 MUTYHQ9UIF7 546 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 CNTN6Q9UQ52 1028 aa15.08■□□□□ 0
SHKBP1-217ENST00000598558 ANHXE9PGG2 379 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 TULP2O00295 520 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 PES1O00541 588 aaKnown RBP15.07■□□□□ 0
SHKBP1-217ENST00000598558 ZNF197O14709 1029 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 MICAL2O94851 1124 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 PNMA6AP0CW24 399 aaPredicted RBP15.07■□□□□ 0
SHKBP1-217ENST00000598558 CSH1P0DML2 217 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 CSH2P0DML3 217 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 PGFP49763 221 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 MAP3K7CLP57077 242 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 VEPH1Q14D04 833 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 PTPN21Q16825 1174 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 ARHGAP17Q68EM7 881 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 CLEC20AQ6ZU45 233 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 GPRIN1Q7Z2K8 1008 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 TTC30AQ86WT1 665 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 RBBP8NLQ8NC74 664 aaPredicted RBP15.07■□□□□ 0
SHKBP1-217ENST00000598558 SCAMP5Q8TAC9 235 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 FGF14Q92915 247 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 ACSF2Q96CM8 615 aaPredicted RBP15.07■□□□□ 0
SHKBP1-217ENST00000598558 MYRFLQ96LU7 910 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 PLA2G2FQ9BZM2 168 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 NAT10Q9H0A0 1025 aaKnown RBP15.07■□□□□ 0
SHKBP1-217ENST00000598558 ATXN3LQ9H3M9 355 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 KCNK12Q9HB15 430 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 APEX2Q9UBZ4 518 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 DNAJC12Q9UKB3 198 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 NCANO14594 1321 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms