RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 RPL10AP62906 217 aaKnown RBP9.86□□□□□ -0.83
ZNF548-206ENST00000597047 SMARCB1Q12824 385 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 PLD1Q13393 1074 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 VEPH1Q14D04 833 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 TSR1Q2NL82 804 aaKnown RBP9.86□□□□□ -0.83
ZNF548-206ENST00000597047 ANKRD54Q6NXT1 300 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 DENND1BQ6P3S1 775 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 SARM1Q6SZW1 724 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 VSTM4Q8IW00 320 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 HS6ST3Q8IZP7 471 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 FUKQ8N0W3 1084 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 FEZF2Q8TBJ5 459 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 C2orf15Q8WU43 125 aaKnown RBP9.86□□□□□ -0.83
ZNF548-206ENST00000597047 TFAP2BQ92481 460 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 SHC3Q92529 594 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 SMG7Q92540 1137 aaKnown RBP9.86□□□□□ -0.83
ZNF548-206ENST00000597047 KCNK16Q96T55 309 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 CORO1BQ9BR76 489 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 NAA15Q9BXJ9 866 aaKnown RBP9.86□□□□□ -0.83
ZNF548-206ENST00000597047 GPR88Q9GZN0 384 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 PLEKHA4Q9H4M7 779 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 ST7Q9NRC1 585 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 CDH22Q9UJ99 828 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 FBXW11Q9UKB1 542 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 TSPAN16Q9UKR8 245 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 YIPF1Q9Y548 306 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 INSL5Q9Y5Q6 135 aa9.86□□□□□ -0.83
ZNF548-206ENST00000597047 NCK2O43639 380 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 XYLBO75191 536 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 BEST1O76090 585 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 MICAL2O94851 1124 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 LCP1P13796 627 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 FERP16591 822 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 TNFAIP3P21580 790 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 SP100P23497 879 aaPredicted RBP9.85□□□□□ -0.83
ZNF548-206ENST00000597047 PBX1P40424 430 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 NTHL1P78549 312 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 TDRD12Q587J7 1177 aaKnown RBP9.85□□□□□ -0.83
ZNF548-206ENST00000597047 CES5AQ6NT32 575 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 PAQR9Q6ZVX9 377 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 GRASPQ7Z6J2 395 aaPredicted RBP9.85□□□□□ -0.83
ZNF548-206ENST00000597047 TCEAL8Q8IYN2 117 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 FAM71AQ8IYT1 594 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 TTC16Q8NEE8 873 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 SLC20A1Q8WUM9 679 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 ZNF606Q8WXB4 792 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 ANP32BQ92688 251 aaKnown RBP9.85□□□□□ -0.83
ZNF548-206ENST00000597047 HLA-CQ95604 372 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 PABPC5Q96DU9 382 aaKnown RBP9.85□□□□□ -0.83
ZNF548-206ENST00000597047 SMARCD1Q96GM5 515 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 PKMYT1Q99640 499 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 HNRNPABQ99729 332 aaKnown RBP9.85□□□□□ -0.83
ZNF548-206ENST00000597047 SMOQ99835 787 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.85□□□□□ -0.83
ZNF548-206ENST00000597047 UBE2ZQ9H832 354 aaPredicted RBP9.85□□□□□ -0.83
ZNF548-206ENST00000597047 SFXN1Q9H9B4 322 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 DZANK1Q9NVP4 752 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 HCFC1R1Q9NWW0 138 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 KIAA1257Q9ULG3 409 aa9.85□□□□□ -0.83
ZNF548-206ENST00000597047 SLC38A8A6NNN8 435 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 TMCO5BA8MYB1 307 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 AKR1B15C9JRZ8 316 aaPredicted RBP9.84□□□□□ -0.83
ZNF548-206ENST00000597047 O00370 1275 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 TRIM66O15016 1216 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 TBX10O75333 385 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 GYPCP04921 128 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 MMEP08473 750 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 CCDC172P0C7W6 258 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 CYP11B1P15538 503 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 GJA1P17302 382 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 PTPN2P17706 415 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 JAM2P57087 298 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 ZBED6P86452 979 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 TFF2Q03403 129 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 PDE4CQ08493 712 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 KLHL30Q0D2K2 578 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 CNGA2Q16280 664 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 ARHGAP17Q68EM7 881 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 VSTM1Q6UX27 236 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 PHLDB2Q86SQ0 1253 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 NOP9Q86U38 636 aaKnown RBP9.84□□□□□ -0.83
ZNF548-206ENST00000597047 BAP1Q92560 729 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 SECISBP2LQ93073 1101 aaKnown RBP9.84□□□□□ -0.83
ZNF548-206ENST00000597047 FUBP3Q96I24 572 aaKnown RBP eCLIP9.84□□□□□ -0.83
ZNF548-206ENST00000597047 ZSWIM1Q9BR11 485 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 DUSP16Q9BY84 665 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 PRKD2Q9BZL6 878 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 MIS12Q9H081 205 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 SYNCQ9H7C4 482 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 LRRC4Q9HBW1 653 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 DMAP1Q9NPF5 467 aaPredicted RBP9.84□□□□□ -0.83
ZNF548-206ENST00000597047 ZNHIT6Q9NWK9 470 aaKnown RBP9.84□□□□□ -0.83
ZNF548-206ENST00000597047 CLEC1BQ9P126 229 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 CD207Q9UJ71 328 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 CAPN11Q9UMQ6 739 aa9.84□□□□□ -0.83
ZNF548-206ENST00000597047 ITIH6Q6UXX5 1313 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 GOLGA6L6A8MZA4 724 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 TULP2O00295 520 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 NPR3P17342 541 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms