RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CNTNAP3BQ96NU0 1288 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 SYT15Q9BQS2 421 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 CNTNAP3Q9BZ76 1288 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 TNMDQ9H2S6 317 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 ZSCAN16Q9H4T2 348 aaPredicted RBP24.26■■□□□ 1.47
SSBP4-203ENST00000593641 ECT2Q9H8V3 914 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 AXIN1O15169 862 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 GDF9O60383 454 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 MAGEA11P43364 429 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 PDE6CP51160 858 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 GALK1P51570 392 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 USP4Q13107 963 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 STK38Q15208 465 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 MAPRE1Q15691 268 aaKnown RBP24.25■■□□□ 1.47
SSBP4-203ENST00000593641 DUOXA2Q1HG44 320 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 AASDHQ4L235 1098 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-203ENST00000593641 PPM1JQ5JR12 505 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 FAM171BQ6P995 826 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 CAMKK1Q8N5S9 505 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 C12orf50Q8NA57 414 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-203ENST00000593641 CYP2S1Q96SQ9 504 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 MAGEC2Q9UBF1 373 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-203ENST00000593641 CDH9Q9ULB4 789 aa24.25■■□□□ 1.47
SSBP4-203ENST00000593641 KIAA1549LQ6ZVL6 1849 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 AKAP3O75969 853 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 ADRB1P08588 477 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 PSMC1P62191 440 aaKnown RBP24.24■■□□□ 1.47
SSBP4-203ENST00000593641 VSTM1Q6UX27 236 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 CBWD2Q8IUF1 395 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 ARL14EPQ8N8R7 260 aaPredicted RBP24.24■■□□□ 1.47
SSBP4-203ENST00000593641 OR5B17Q8NGF7 314 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 DDX1Q92499 740 aaKnown RBP24.24■■□□□ 1.47
SSBP4-203ENST00000593641 CD101Q93033 1021 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 MYLPFQ96A32 169 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 INTS4Q96HW7 963 aaKnown RBP24.24■■□□□ 1.47
SSBP4-203ENST00000593641 SLC22A12Q96S37 553 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 ARRDC1-AS1Q9H2J1 176 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 KIAA1586Q9HCI6 787 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 MTMR6Q9Y217 621 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 WNT6Q9Y6F9 365 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 PTPRJQ12913 1337 aa24.24■■□□□ 1.47
SSBP4-203ENST00000593641 EPN2O95208 641 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 ANXA13P27216 316 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 NR1H3Q13133 447 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 IL31Q6EBC2 164 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 KBTBD6Q86V97 674 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 WDR49Q8IV35 697 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 RPLP0P6Q8NHW5 317 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 KBTBD7Q8WVZ9 684 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 ACDQ96AP0 544 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 HHIPQ96QV1 700 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 MMS19Q96T76 1030 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 FBRSL1Q9HCM7 1045 aaKnown RBP24.23■■□□□ 1.47
SSBP4-203ENST00000593641 HSPBP1Q9NZL4 362 aa24.23■■□□□ 1.47
SSBP4-203ENST00000593641 C2orf78A6NCI8 922 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 ATP2C2O75185 946 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 HDCP19113 662 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 LMO2P25791 158 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 GRIK1P39086 918 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 NASPP49321 788 aaPredicted RBP24.22■■□□□ 1.47
SSBP4-203ENST00000593641 CYP27A1Q02318 531 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 PSMD2Q13200 908 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 EML3Q32P44 896 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 NAIF1Q69YI7 327 aaPredicted RBP24.22■■□□□ 1.47
SSBP4-203ENST00000593641 GLIS3Q8NEA6 775 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 SH3RF2Q8TEC5 729 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 HPS3Q969F9 1004 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 SPATA17Q96L03 361 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 CEP295NLQ96MC4 621 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 CUEDC2Q9H467 287 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 EHD2Q9NZN4 543 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 GCNT4Q9P109 453 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 ARHGAP26Q9UNA1 814 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 CHD8Q9HCK8 2581 aa24.22■■□□□ 1.47
SSBP4-203ENST00000593641 MAP1BP46821 2468 aaKnown RBP24.21■■□□□ 1.47
SSBP4-203ENST00000593641 EIF3DO15371 548 aaKnown RBP eCLIP24.21■■□□□ 1.47
SSBP4-203ENST00000593641 STX6O43752 255 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 KCNA4P22459 653 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 WARSP23381 471 aaKnown RBP24.21■■□□□ 1.47
SSBP4-203ENST00000593641 BDNFP23560 247 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 RAP1GAPP47736 663 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 ASIC1P78348 528 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 AMPD3Q01432 767 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 DENND5BQ6ZUT9 1274 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 SYT13Q7L8C5 426 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 LIMS2Q7Z4I7 341 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 CCDC26Q8TAB7 109 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 TRIM9Q9C026 710 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 CRTAC1Q9NQ79 661 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 KBTBD4Q9NVX7 518 aa24.21■■□□□ 1.47
SSBP4-203ENST00000593641 TRIM66O15016 1216 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 NFATC1O95644 943 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 PDGFRBP09619 1106 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 ZNF806P0C7X5 589 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 TCF3P15923 654 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 PFKLP17858 780 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 SF3A2Q15428 464 aaKnown RBP24.2■■□□□ 1.46
SSBP4-203ENST00000593641 CCDC6Q16204 474 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 LINC00301Q8NCQ3 95 aa24.2■■□□□ 1.46
SSBP4-203ENST00000593641 FNBP1Q96RU3 617 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms