RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 APBA2Q99767 749 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 SH3GL3Q99963 347 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 GRID1Q9ULK0 1009 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 SUFUQ9UMX1 484 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 RNF103-CHMP3A0A140T963 221 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 TNFRSF8P28908 595 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 STIP1P31948 543 aaKnown RBP13.25□□□□□ -0.29
DNMT1-228ENST00000592705 AVPR1AP37288 418 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 RAB27AP51159 221 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 ACVR2BQ13705 512 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 MDH1BQ5I0G3 518 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 MTBPQ96DY7 904 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 XAB2Q9HCS7 855 aaKnown RBP13.25□□□□□ -0.29
DNMT1-228ENST00000592705 DDTLA6NHG4 134 aaPredicted RBP13.25□□□□□ -0.29
DNMT1-228ENST00000592705 CKMP06732 381 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 ODC1P11926 461 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 TRADDQ15628 312 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 CBWD2Q8IUF1 395 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 ATP9BO43861 1147 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 RNASEH1O60930 286 aaKnown RBP13.25□□□□□ -0.29
DNMT1-228ENST00000592705 NPTXRO95502 500 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 HMGCRP04035 888 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 TGFB3P10600 412 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 ZNF235Q14590 738 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 KIRREL3Q8IZU9 778 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 SKA1Q96BD8 255 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 CMTM5Q96DZ9 223 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 KLF6Q99612 283 aaPredicted RBP13.25□□□□□ -0.29
DNMT1-228ENST00000592705 EPAS1Q99814 870 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 BLOC1S4Q9NUP1 217 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 UBQLN1Q9UMX0 589 aaKnown RBP13.25□□□□□ -0.29
DNMT1-228ENST00000592705 GARTP22102 1010 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 DNAJB2P25686 324 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 OAZ1P54368 228 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 EPHB3P54753 998 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 TPI1P60174 286 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 IRX1P78414 480 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-228ENST00000592705 SPDYCQ5MJ68 293 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 SLAIN1Q8ND83 568 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 ATG4AQ8WYN0 398 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 MED15Q96RN5 788 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 PRDM4Q9UKN5 801 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 KRT4P19013 534 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 ZBTB17Q13105 803 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 FRA10AC1Q70Z53 315 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 TMC3Q7Z5M5 1100 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 LCA5Q86VQ0 697 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 FAM71DQ8N9W8 422 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 CAMKK2Q96RR4 588 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 CBWD1Q9BRT8 395 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 MARCOQ9UEW3 520 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-228ENST00000592705 DDX20Q9UHI6 824 aaKnown RBP13.24□□□□□ -0.29
DNMT1-228ENST00000592705 IRF6O14896 467 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 MAPTP10636 758 aaKnown RBP13.24□□□□□ -0.29
DNMT1-228ENST00000592705 BRD2P25440 801 aaKnown RBP13.24□□□□□ -0.29
DNMT1-228ENST00000592705 VHLP40337 213 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 RGS7P49802 495 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 RPL10AP62906 217 aaKnown RBP13.24□□□□□ -0.29
DNMT1-228ENST00000592705 GTF2H3Q13889 308 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 UGP2Q16851 508 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 TDRD10Q5VZ19 366 aaKnown RBP13.24□□□□□ -0.29
DNMT1-228ENST00000592705 TMEM154Q6P9G4 183 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 C16orf89Q6UX73 402 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 THTPAQ9BU02 230 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 KCNA3P22001 575 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 CCNG2Q16589 344 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 TXNRD3Q86VQ6 643 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 C1orf131Q8NDD1 294 aaKnown RBP13.24□□□□□ -0.29
DNMT1-228ENST00000592705 PPHLN1Q8NEY8 458 aaKnown RBP13.24□□□□□ -0.29
DNMT1-228ENST00000592705 ATXN7L3BQ96GX2 97 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 NT5C1AQ9BXI3 368 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 ING2Q9H160 280 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 MRGBPQ9NV56 204 aa13.24□□□□□ -0.29
DNMT1-228ENST00000592705 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 HARS2P49590 506 aaKnown RBP13.23□□□□□ -0.29
DNMT1-228ENST00000592705 PRAMEP78395 509 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 SMTNL2Q2TAL5 461 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 ITIH5Q86UX2 942 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 SLC20A1Q8WUM9 679 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 PLEKHA5Q9HAU0 1116 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 METTL5Q9NRN9 209 aaKnown RBP13.23□□□□□ -0.29
DNMT1-228ENST00000592705 PROSCO94903 275 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 FAM153BP0C7A2 387 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 SPRP35270 261 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-228ENST00000592705 FLT3LGP49771 235 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 HSD17B4P51659 736 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 MCL1Q07820 350 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 ZNF844Q08AG5 666 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 NSUN2Q08J23 767 aaKnown RBP eCLIP13.23□□□□□ -0.29
DNMT1-228ENST00000592705 CNGA3Q16281 694 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 FAM153CQ494X1 144 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 EXD1Q8NHP7 514 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 SH3KBP1Q96B97 665 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 FAM153AQ9UHL3 310 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 C3orf70A6NLC5 250 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-228ENST00000592705 ARP10275 920 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 PTPRAP18433 802 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 TARSP26639 723 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms