RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 NEK3P51956 506 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 SLC18A2Q05940 514 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 ACSBG2Q5FVE4 666 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 ZBTB41Q5SVQ8 909 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 SH2D5Q6ZV89 423 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 BBS12Q6ZW61 710 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 WDTC1Q8N5D0 677 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 SIP14410 1827 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 A0A0B4J269 797 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 GOLGA8RI6L899 631 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 GYG2O15488 501 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 AHCYL1O43865 530 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 COQ9O75208 318 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 PDHA1P08559 390 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 CCND2P30279 289 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 PRKCEQ02156 737 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 SNX30Q5VWJ9 437 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 CYTH2Q99418 400 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 TAS2R1Q9NYW7 299 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 SAE1Q9UBE0 346 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 POLIQ9UNA4 740 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 LRCH1Q9Y2L9 728 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 LPXNO60711 386 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 MT-ND3P03897 115 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 NR3C2P08235 984 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 EIF4BP23588 611 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 SERPINB3P29508 390 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 CCDC6Q16204 474 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 CCDC60Q8IWA6 550 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 PDIK1LQ8N165 341 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 AKT1S1Q96B36 256 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 KLF6Q99612 283 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 TMEM120AQ9BXJ8 343 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 CNTN3Q9P232 1028 aa15.56■□□□□ 0.08
SMARCA4-219ENST00000592604 ADGRA2Q96PE1 1338 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 IQANK1A0A1B0GTG1 560 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 TCRBV7S3A2A0A539 114 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 CST8O60676 142 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 PIAS1O75925 651 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 TMEM63AO94886 807 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 ASS1P00966 412 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 TUBP50607 506 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 SLC25A11Q02978 314 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 SLC34A1Q06495 639 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 KPNB1Q14974 876 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 RCN1Q15293 331 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 NRG4Q8WWG1 115 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 RSAD2Q8WXG1 361 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 MSTO1Q9BUK6 570 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 SYNCQ9H7C4 482 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 PCDHGC3Q9UN70 934 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 ASB3Q9Y575 518 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 ENO4A6NNW6 628 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 PSMG1O95456 288 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 EMC2Q15006 297 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 BBS9Q3SYG4 887 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 XKR3Q5GH77 459 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 SCARA3Q6AZY7 606 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 TMEM154Q6P9G4 183 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 ABHD15Q6UXT9 468 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 THNSL1Q8IYQ7 743 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 APOPT1Q96IL0 206 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 C10orf88Q9H8K7 445 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 STX18Q9P2W9 335 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 AGTPBP1Q9UPW5 1226 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 TELO2Q9Y4R8 837 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 DOCK5Q9H7D0 1870 aa15.55■□□□□ 0.08
SMARCA4-219ENST00000592604 K7ERI5 159 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 KLF11O14901 512 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 KRT7P08729 469 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 AP3M2P53677 418 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 BAATQ14032 418 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 SLC44A1Q8WWI5 657 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 IMPG2Q9BZV3 1241 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 ALG13Q9NP73 1137 aaKnown RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 FBXO6Q9NRD1 293 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 EME2A4GXA9 379 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 SPDYE5A6NIY4 337 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 KRT36O76013 467 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 RGS20O76081 388 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 CST3P01034 146 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 RARBP10826 455 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 KDELR1P24390 212 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 NAMPTP43490 491 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 DYNLT1P63172 113 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 MXRA7P84157 204 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 ZBTB16Q05516 673 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 CBLBQ13191 982 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 MTERF2Q49AM1 385 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 GPAT2Q6NUI2 795 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 VPS52Q8N1B4 723 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 ARFGAP1Q8N6T3 406 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 SCG3Q8WXD2 468 aaKnown RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 MCUR1Q96AQ8 359 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 CCDC97Q96F63 343 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 PRR11Q96HE9 360 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 SERAC1Q96JX3 654 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 SH3GL3Q99963 347 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 TARS2Q9BW92 718 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms