RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ADAM28Q9UKQ2 775 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 ITGA11Q9UKX5 1188 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 AGAP1Q9UPQ3 857 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 NFE2L3Q9Y4A8 694 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 PCDHGC5Q9Y5F6 944 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 MYO7AQ13402 2215 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 EYSQ5T1H1 3165 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 PLXNA3P51805 1871 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 PRRC2BQ5JSZ5 2229 aaKnown RBP6.87□□□□□ -1.31
VPS4B-205ENST00000591383 METTL12A8MUP2 240 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 BECN2A8MW95 431 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 KCNJ18B7U540 433 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 C5orf67F2Z3F1 127 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 ENC1O14682 589 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 MAPK13O15264 365 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 KLF4O43474 513 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 STX10O60499 249 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 GNA14O95837 355 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 HLA-DRAP01903 254 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 ALDH2P05091 517 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 RB1P06400 928 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 ODC1P11926 461 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 CYP3A5P20815 502 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 TKTP29401 623 aaKnown RBP6.87□□□□□ -1.31
VPS4B-205ENST00000591383 LRPAP1P30533 357 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 RPL9P32969 192 aaKnown RBP6.87□□□□□ -1.31
VPS4B-205ENST00000591383 BRCC3P46736 316 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 TAF6P49848 677 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 ZNF165P49910 485 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 POU5F1Q01860 360 aaKnown RBP6.87□□□□□ -1.31
VPS4B-205ENST00000591383 LMNB2Q03252 620 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 SPEM2Q0P670 501 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 MYO1EQ12965 1108 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 KCNJ12Q14500 433 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 TCEAL1Q15170 157 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 PTPROQ16827 1216 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 UPP1Q16831 310 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 DUOXA2Q1HG44 320 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 TIGD5Q53EQ6 642 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 SNAP47Q5SQN1 464 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 FAM171A1Q5VUB5 890 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 C9orf57Q5W0N0 161 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 KIAA1841Q6NSI8 718 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 FOXR2Q6PJQ5 311 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 DSTYKQ6XUX3 929 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 RIPOR1Q6ZS17 1223 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 CEP57Q86XR8 500 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 VPS52Q8N1B4 723 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 GOLM1Q8NBJ4 401 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 MICAL1Q8TDZ2 1067 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 PARD3BQ8TEW8 1205 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 POF1BQ8WVV4 589 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 ELMO3Q96BJ8 720 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 HHIPQ96QV1 700 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 TSPAN18Q96SJ8 248 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 VN1R3Q9BXE9 311 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 IMPG2Q9BZV3 1241 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 ZBP1Q9H171 429 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 TSPY26PQ9H489 355 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 THAP9Q9H5L6 903 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 METTL14Q9HCE5 456 aaKnown RBP6.87□□□□□ -1.31
VPS4B-205ENST00000591383 TAB2Q9NYJ8 693 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 PUF60Q9UHX1 559 aaKnown RBP6.87□□□□□ -1.31
VPS4B-205ENST00000591383 SIX4Q9UIU6 781 aa6.87□□□□□ -1.31
VPS4B-205ENST00000591383 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.87□□□□□ -1.31
VPS4B-205ENST00000591383 A0A096LPE4 126 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 A0A1W2PPZ6 126 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 FAM187AA6NFU0 413 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 H3BNC9 293 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TMEM189-UBE2V1I3L0A0 370 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TRAPPC3O43617 180 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 BNIP3LO60238 219 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 N4BP1O75113 896 aaKnown RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 AFPP02771 609 aaKnown RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 SOD2P04179 222 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TPM2P07951 284 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TFE3P19532 575 aaPredicted RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 IGFBP6P24592 240 aaPredicted RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 DNAJB1P25685 340 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 PNPLA4P41247 253 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 AP3M2P53677 418 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 MYL6P60660 151 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TNNC1P63316 161 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TPM4P67936 248 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 NOP14P78316 857 aaKnown RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 RBP5P82980 135 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 UBE3AQ05086 875 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 PPP3CAQ08209 521 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 ELAVL2Q12926 359 aaKnown RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 SMC1AQ14683 1233 aaKnown RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 PTPN14Q15678 1187 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 PSMD5Q16401 504 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 RTP2Q5QGT7 225 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 C1orf220Q5T0J3 134 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 ZNF280DQ6N043 979 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 DCLRE1AQ6PJP8 1040 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TRAPPC11Q7Z392 1133 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 FRMD5Q7Z6J6 570 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 FILIP1Q7Z7B0 1213 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms