RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 NRLP54845 237 aa20.14■□□□□ 0.81
MBD3-207ENST00000590550 TFAMQ00059 246 aaKnown RBP20.14■□□□□ 0.81
MBD3-207ENST00000590550 EFTUD2Q15029 972 aaKnown RBP eCLIP20.14■□□□□ 0.812e-6■■■■■ 28.8
MBD3-207ENST00000590550 RASIP1Q5U651 963 aa20.14■□□□□ 0.81
MBD3-207ENST00000590550 TRIM50Q86XT4 487 aa20.14■□□□□ 0.81
MBD3-207ENST00000590550 RCOR2Q8IZ40 523 aa20.14■□□□□ 0.81
MBD3-207ENST00000590550 ANKRD35Q8N283 1001 aa20.14■□□□□ 0.81
MBD3-207ENST00000590550 LRRC71Q8N4P6 559 aa20.14■□□□□ 0.81
MBD3-207ENST00000590550 LRRC8CQ8TDW0 803 aa20.14■□□□□ 0.81
MBD3-207ENST00000590550 VCPIP1Q96JH7 1222 aa20.14■□□□□ 0.81
MBD3-207ENST00000590550 TRAPPC9Q96Q05 1148 aa20.14■□□□□ 0.81
MBD3-207ENST00000590550 PREBQ9HCU5 417 aa20.14■□□□□ 0.81
MBD3-207ENST00000590550 RLFQ13129 1914 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 A0A1W2PPM1 405 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 TJP3O95049 919 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 CBX6O95503 412 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 GJB1P08034 283 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 IMPDH2P12268 514 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 SKIV2L2P42285 1042 aaKnown RBP20.13■□□□□ 0.81
MBD3-207ENST00000590550 ZNF280AP59817 542 aaPredicted RBP20.13■□□□□ 0.81
MBD3-207ENST00000590550 SETDB1Q15047 1291 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 PARP6Q2NL67 630 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 AGGF1Q8N302 714 aaeCLIP20.13■□□□□ 0.81
MBD3-207ENST00000590550 ALLCQ8N6M5 410 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 BBOF1Q8ND07 529 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 PITPNM3Q9BZ71 974 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 PARP14Q460N5 1801 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 FAM47DPA6NHR8 397 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 SPDYE16A6NNV3 312 aaPredicted RBP20.13■□□□□ 0.81
MBD3-207ENST00000590550 ASS1P00966 412 aaKnown RBP20.13■□□□□ 0.81
MBD3-207ENST00000590550 UBTFL6P0CB48 400 aaPredicted RBP20.13■□□□□ 0.81
MBD3-207ENST00000590550 UBA1P22314 1058 aaKnown RBP20.13■□□□□ 0.81
MBD3-207ENST00000590550 RAP1GAPP47736 663 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 GDF10P55107 478 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 STXBP2Q15833 593 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 SYCP2LQ5T4T6 812 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 MAGEB18Q96M61 343 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 PLEKHG4BQ96PX9 1271 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 MMADHCQ9H3L0 296 aaPredicted RBP20.13■□□□□ 0.81
MBD3-207ENST00000590550 NXF1Q9UBU9 619 aaKnown RBP20.13■□□□□ 0.81
MBD3-207ENST00000590550 CNTN6Q9UQ52 1028 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 RGPD3A6NKT7 1758 aaPredicted RBP20.13■□□□□ 0.81
MBD3-207ENST00000590550 RGPD4Q7Z3J3 1758 aa20.13■□□□□ 0.81
MBD3-207ENST00000590550 ZNF132P52740 706 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 PDIA2Q13087 525 aaKnown RBP20.12■□□□□ 0.81
MBD3-207ENST00000590550 MYBPC3Q14896 1274 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 EAPPQ56P03 285 aaPredicted RBP20.12■□□□□ 0.81
MBD3-207ENST00000590550 TRABD2AQ86V40 505 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 EMC1Q8N766 993 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 OPTNQ96CV9 577 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 C12orf65Q9H3J6 166 aaKnown RBP20.12■□□□□ 0.81
MBD3-207ENST00000590550 ADAMTS5Q9UNA0 930 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 hCG_1818297A0A087WSY0 165 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 ETS2P15036 469 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 RPA3P35244 121 aaPredicted RBP20.12■□□□□ 0.81
MBD3-207ENST00000590550 CETN2P41208 172 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 KHDC1Q4VXA5 237 aaKnown RBP20.12■□□□□ 0.81
MBD3-207ENST00000590550 ANGEL2Q5VTE6 544 aaKnown RBP20.12■□□□□ 0.81
MBD3-207ENST00000590550 RNF43Q68DV7 783 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 THNSL1Q8IYQ7 743 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 ENDOVQ8N8Q3 282 aaKnown RBP20.12■□□□□ 0.81
MBD3-207ENST00000590550 SCG3Q8WXD2 468 aaKnown RBP20.12■□□□□ 0.81
MBD3-207ENST00000590550 CFAP57Q96MR6 1250 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 R3HDMLQ9H3Y0 253 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 TRABDQ9H4I3 376 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 GALNT8Q9NY28 637 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 LRCH1Q9Y2L9 728 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 hCG_2014768A0A024R1R8 64 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 LDHAP00338 332 aaKnown RBP20.12■□□□□ 0.81
MBD3-207ENST00000590550 PIGRP01833 764 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 ZCCHC18P0CG32 403 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 RFC1P35251 1148 aaPredicted RBP20.12■□□□□ 0.81
MBD3-207ENST00000590550 SNX30Q5VWJ9 437 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 ANKRD22Q5VYY1 191 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 RFWD3Q6PCD5 774 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 CATSPERGQ6ZRH7 1159 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 AS3MTQ9HBK9 375 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 POLIQ9UNA4 740 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 AFG3L2Q9Y4W6 797 aa20.12■□□□□ 0.81
MBD3-207ENST00000590550 TCRBV5S1A1TA0A578 114 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 NFKBIEO00221 500 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 ADCY3O60266 1144 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 CD48P09326 243 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 CD19P15391 556 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 RXRBP28702 533 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 MCL1Q07820 350 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 CMPK2Q5EBM0 449 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 JOSD2Q8TAC2 188 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 PHIPQ8WWQ0 1821 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 IL1R2P27930 398 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 SSTR1P30872 391 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 CDKN2BP42772 138 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 VCPP55072 806 aaKnown RBP20.11■□□□□ 0.81
MBD3-207ENST00000590550 ENPEPQ07075 957 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 MTFR1Q15390 333 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 OASLQ15646 514 aaKnown RBP20.11■□□□□ 0.81
MBD3-207ENST00000590550 TFDP3Q5H9I0 405 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 C1QTNF12Q5T7M4 302 aa20.11■□□□□ 0.81
MBD3-207ENST00000590550 ZNF772Q68DY9 489 aaPredicted RBP20.11■□□□□ 0.81
MBD3-207ENST00000590550 DENND1BQ6P3S1 775 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms