RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 HOXA9P31269 272 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 ELF1P32519 619 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 KRT9P35527 623 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 PDE6CP51160 858 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 E4F1Q66K89 784 aaPredicted RBP12.78□□□□□ -0.36
APOC1-206ENST00000590334 ELMSAN1Q6PJG2 1045 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 SPATA31D4Q6ZUB0 917 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 NOP9Q86U38 636 aaKnown RBP12.78□□□□□ -0.36
APOC1-206ENST00000590334 CNGA4Q8IV77 575 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 DRC7Q8IY82 874 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 TTC9BQ8N6N2 239 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 OR8K1Q8NGG5 319 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 CASP10Q92851 521 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 SYT11Q9BT88 431 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 MED10Q9BTT4 135 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 DUSP16Q9BY84 665 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 RHOBTB2Q9BYZ6 727 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 UBXN6Q9BZV1 441 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 CYP4F11Q9HBI6 524 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 MAN1C1Q9NR34 630 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 TMEM30AQ9NV96 361 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 DZANK1Q9NVP4 752 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 TSPAN16Q9UKR8 245 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 SLC27A5Q9Y2P5 690 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 INSL5Q9Y5Q6 135 aa12.78□□□□□ -0.36
APOC1-206ENST00000590334 AKR1B15C9JRZ8 316 aaPredicted RBP12.77□□□□□ -0.37
APOC1-206ENST00000590334 PRRG1O14668 218 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 TRIM66O15016 1216 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 ZMYND10O75800 440 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 AP1G2O75843 785 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 MICAL2O94851 1124 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 C8AP07357 584 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 POU2F2P09086 479 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 FAM200BP0CF97 657 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 FOSL2P15408 326 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 NPR3P17342 541 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 ADORA2BP29275 332 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 CACNA2D1P54289 1103 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 BCAT1P54687 386 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 RPL10AP62906 217 aaKnown RBP12.77□□□□□ -0.37
APOC1-206ENST00000590334 CDR2Q01850 454 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 ASIC2Q16515 512 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 GOLGA7BQ2TAP0 167 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 MGAT5BQ3V5L5 792 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 LIN9Q5TKA1 542 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 HGSNATQ68CP4 663 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 CLEC20AQ6ZU45 233 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 TTC30AQ86WT1 665 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 TC2NQ8N9U0 490 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 ZMIZ2Q8NF64 920 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 CMASQ8NFW8 434 aaPredicted RBP12.77□□□□□ -0.37
APOC1-206ENST00000590334 SLC7A14Q8TBB6 771 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 SPATA17Q96L03 361 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 C8orf48Q96LL4 319 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 SMOQ99835 787 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 LHX5Q9H2C1 402 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 IGFLR1Q9H665 355 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 PNPLA8Q9NP80 782 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 DMAP1Q9NPF5 467 aaPredicted RBP12.77□□□□□ -0.37
APOC1-206ENST00000590334 KRT82Q9NSB4 513 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 ABHD10Q9NUJ1 306 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 ZDHHC7Q9NXF8 308 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 HESX1Q9UBX0 185 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 YIPF1Q9Y548 306 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 BZW2Q9Y6E2 419 aaKnown RBP12.77□□□□□ -0.37
APOC1-206ENST00000590334 NOTCH4Q99466 2003 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 PRUNE2Q8WUY3 3088 aa12.77□□□□□ -0.37
APOC1-206ENST00000590334 ANAPC1Q9H1A4 1944 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 LINC01565O15544 149 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 BEST1O76090 585 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 SERPING1P05155 500 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 CFHP08603 1231 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 HNRNPA1P09651 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
APOC1-206ENST00000590334 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 SRGAP2BP0DMP2 458 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 CHRNB2P17787 502 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 ATF6P18850 670 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 CDH5P33151 784 aaPredicted RBP12.76□□□□□ -0.37
APOC1-206ENST00000590334 GPD2P43304 727 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 ALDH1A3P47895 512 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 CDR1P51861 262 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 ADKP55263 362 aaKnown RBP12.76□□□□□ -0.37
APOC1-206ENST00000590334 RBM10P98175 930 aaKnown RBP12.76□□□□□ -0.37
APOC1-206ENST00000590334 ARID5AQ03989 594 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 BST2Q10589 180 aaKnown RBP12.76□□□□□ -0.37
APOC1-206ENST00000590334 PLD1Q13393 1074 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 LLGL2Q6P1M3 1020 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 WDR59Q6PJI9 974 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 CYP26C1Q6V0L0 522 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 OLIG1Q8TAK6 271 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 SLC20A1Q8WUM9 679 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 SLC35F5Q8WV83 523 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 PABPC5Q96DU9 382 aaKnown RBP12.76□□□□□ -0.37
APOC1-206ENST00000590334 KCNK16Q96T55 309 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 SEPT5Q99719 369 aaPredicted RBP12.76□□□□□ -0.37
APOC1-206ENST00000590334 ASB3Q9Y575 518 aa12.76□□□□□ -0.37
APOC1-206ENST00000590334 C5orf42Q9H799 3197 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 HHLA1C9JL84 531 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 F8VP50 259 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 M0QYV0 167 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms