RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 PPP1R15BQ5SWA1 713 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 LMBRD2Q68DH5 695 aaPredicted RBP8.12□□□□□ -1.11
NPC1-208ENST00000590301 CC2D1AQ6P1N0 951 aaPredicted RBP8.12□□□□□ -1.11
NPC1-208ENST00000590301 FOXD4L3Q6VB84 417 aaPredicted RBP8.12□□□□□ -1.11
NPC1-208ENST00000590301 ERMP1Q7Z2K6 904 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 OSTM1Q86WC4 334 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 SCN4BQ8IWT1 228 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 NELFCDQ8IXH7 590 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 MAB21L3Q8N8X9 362 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 MYCBPAPQ8TBZ2 947 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 USP13Q92995 863 aaPredicted RBP8.12□□□□□ -1.11
NPC1-208ENST00000590301 CCDC47Q96A33 483 aaKnown RBP8.12□□□□□ -1.11
NPC1-208ENST00000590301 CCDC127Q96BQ5 260 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 CCDC34Q96HJ3 373 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 LRRC3BQ96PB8 259 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 FAM83CQ9BQN1 747 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 ELOVL4Q9GZR5 314 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 BLZF1Q9H2G9 400 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 SLC39A2Q9NP94 309 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 GKN1Q9NS71 199 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 RAB23Q9ULC3 237 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 MAGED2Q9UNF1 606 aaPredicted RBP8.12□□□□□ -1.11
NPC1-208ENST00000590301 ATP8B3O60423 1300 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 FAM237AA0A1B0GTK4 181 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 PDXKO00764 312 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 CLIC2O15247 247 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 ACTN4O43707 911 aaKnown RBP8.11□□□□□ -1.11
NPC1-208ENST00000590301 ATG13O75143 517 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 PHACTR2O75167 634 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 CKMP06732 381 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 P4HA1P13674 534 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 PFKFB1P16118 471 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 ID4P47928 161 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 NOP14P78316 857 aaKnown RBP8.11□□□□□ -1.11
NPC1-208ENST00000590301 CYP27A1Q02318 531 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 FAM160A1Q05DH4 1040 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 ENPEPQ07075 957 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 GRSF1Q12849 480 aaKnown RBP eCLIP8.11□□□□□ -1.11
NPC1-208ENST00000590301 RUNX3Q13761 415 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 CCINQ13939 588 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 KCNB1Q14721 858 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 TXNDC8Q6A555 127 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 DENND5BQ6ZUT9 1274 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 CPA6Q8N4T0 437 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 RDH13Q8NBN7 331 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 CCDC26Q8TAB7 109 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 TAF4BQ92750 862 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 ATP2A3Q93084 1043 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 MYLPFQ96A32 169 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 CCDC97Q96F63 343 aaPredicted RBP8.11□□□□□ -1.11
NPC1-208ENST00000590301 PAGE5Q96GU1 130 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 ZFYVE19Q96K21 471 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 SPATA32Q96LK8 384 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 C8orf48Q96LL4 319 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 HINFPQ9BQA5 517 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 TTLL2Q9BWV7 592 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 SCAND2PQ9GZW5 306 aaPredicted RBP8.11□□□□□ -1.11
NPC1-208ENST00000590301 XYLT2Q9H1B5 865 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 CRTAC1Q9NQ79 661 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 DMAC2Q9NW81 257 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 GTSE1Q9NYZ3 720 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 TRPM5Q9NZQ8 1165 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 NCDNQ9UBB6 729 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 SERTAD1Q9UHV2 236 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 SMG5Q9UPR3 1016 aaKnown RBP8.11□□□□□ -1.11
NPC1-208ENST00000590301 HPSEQ9Y251 543 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 CACNA1AO00555 2505 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 CFAP54Q96N23 3096 aa8.11□□□□□ -1.11
NPC1-208ENST00000590301 PTPRZ1P23471 2315 aaPredicted RBP8.11□□□□□ -1.11
NPC1-208ENST00000590301 DOCK8Q8NF50 2099 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 VPS13AQ96RL7 3174 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 MTCL1Q9Y4B5 1905 aaKnown RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 CCDC163A0A0D9SF12 145 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 A0A1W2PQ27 194 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 A0A1W2PQ64 194 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 A0A1W2PQD8 194 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 TRDMT1O14717 391 aaKnown RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 IKBKBO14920 756 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 MAPK13O15264 365 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 CALUO43852 315 aaPredicted RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 KLRC4O43908 158 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 FOXD2O60548 495 aaPredicted RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 LRP3O75074 770 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 ATP2C2O75185 946 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 TADA3O75528 432 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 CST3P01034 146 aaPredicted RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 RPN1P04843 607 aaKnown RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 PDGFRBP09619 1106 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 PTPN1P18031 435 aaKnown RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 TRIM21P19474 475 aaKnown RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 DRD1P21728 446 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 LMO2P25791 158 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 CASP1P29466 404 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 GRIK1P39086 918 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 SOX9P48436 509 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 GPR15P49685 360 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 MYL6P60660 151 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 PSMC1P62191 440 aaKnown RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 TNK2Q07912 1038 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 STK4Q13043 487 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms