RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 STYXL1Q9Y6J8 313 aa16.35■□□□□ 0.21
ACTN4-211ENST00000589528 MYOFQ9NZM1 2061 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 ASPMQ8IZT6 3477 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 PATE3B3GLJ2 98 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 MAP3K13O43283 966 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 HDCP19113 662 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 CSRP1P21291 193 aaKnown RBP16.34■□□□□ 0.21
ACTN4-211ENST00000589528 PCSK1P29120 753 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 CCDC33Q8N5R6 958 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 USP33Q8TEY7 942 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
ACTN4-211ENST00000589528 CNOT6LQ96LI5 555 aaKnown RBP16.34■□□□□ 0.21
ACTN4-211ENST00000589528 MYRFLQ96LU7 910 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 FIZ1Q96SL8 496 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 FAM213AQ9BRX8 229 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 SCNM1Q9BWG6 230 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 NUSAP1Q9BXS6 441 aaKnown RBP16.34■□□□□ 0.21
ACTN4-211ENST00000589528 SLC32A1Q9H598 525 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 BLOC1S4Q9NUP1 217 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 MMP17Q9ULZ9 603 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 EXOC7Q9UPT5 735 aa16.34■□□□□ 0.21
ACTN4-211ENST00000589528 MYO18AQ92614 2054 aaKnown RBP16.34■□□□□ 0.21
ACTN4-211ENST00000589528 BAHCC1Q9P281 2608 aa16.33■□□□□ 0.21
ACTN4-211ENST00000589528 CEP192Q8TEP8 1941 aa16.33■□□□□ 0.21
ACTN4-211ENST00000589528 PCNX2A6NKB5 2137 aa16.33■□□□□ 0.21
ACTN4-211ENST00000589528 C2orf78A6NCI8 922 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 BCKDHBP21953 392 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 LHX1P48742 406 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 IRX4P78413 519 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 LMAN2Q12907 356 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 CFAP221Q4G0U5 840 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 LMBRD2Q68DH5 695 aaPredicted RBP16.33■□□□□ 0.2
ACTN4-211ENST00000589528 CRELD2Q6UXH1 353 aaPredicted RBP16.33■□□□□ 0.2
ACTN4-211ENST00000589528 C4orf50Q6ZRC1 276 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 LPCAT2Q7L5N7 544 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 ADGRF2Q8IZF7 708 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 CSGALNACT2Q8N6G5 542 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 KDF1Q8NAX2 398 aaPredicted RBP16.33■□□□□ 0.2
ACTN4-211ENST00000589528 MDGA1Q8NFP4 955 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 HVCN1Q96D96 273 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 FUBP3Q96I24 572 aaKnown RBP eCLIP16.33■□□□□ 0.2
ACTN4-211ENST00000589528 LINC00597Q9H2U6 94 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 ST6GALNAC4Q9H4F1 302 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 MRPL44Q9H9J2 332 aaKnown RBP16.33■□□□□ 0.2
ACTN4-211ENST00000589528 BCCIPQ9P287 314 aaKnown RBP eCLIP16.33■□□□□ 0.2
ACTN4-211ENST00000589528 ITGA11Q9UKX5 1188 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 SNX9Q9Y5X1 595 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 ATRXP46100 2492 aa16.33■□□□□ 0.2
ACTN4-211ENST00000589528 MYMKA6NI61 221 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 CDX4O14627 284 aaPredicted RBP16.32■□□□□ 0.2
ACTN4-211ENST00000589528 BMP15O95972 392 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 LDHAP00338 332 aaKnown RBP16.32■□□□□ 0.2
ACTN4-211ENST00000589528 ANXA13P27216 316 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 LONP1P36776 959 aaKnown RBP16.32■□□□□ 0.2
ACTN4-211ENST00000589528 COL9A2Q14055 689 aaPredicted RBP16.32■□□□□ 0.2
ACTN4-211ENST00000589528 CRY1Q16526 586 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 TRIM61Q5EBN2 209 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 DYMQ7RTS9 669 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 ZNF720Q7Z2F6 126 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 RASSF3Q86WH2 238 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 SFR1Q86XK3 245 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 LRRC52Q8N7C0 313 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 C1orf127Q8N9H9 656 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 DEFB124Q8NES8 71 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 SPATA18Q8TC71 538 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 LRRC15Q8TF66 581 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 SAAL1Q96ER3 474 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 RBAKQ9NYW8 714 aaPredicted RBP16.32■□□□□ 0.2
ACTN4-211ENST00000589528 GCNT4Q9P109 453 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 ARHGAP26Q9UNA1 814 aa16.32■□□□□ 0.2
ACTN4-211ENST00000589528 IGF2RP11717 2491 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 ADAMTS9Q9P2N4 1935 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 K7EQS6 105 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 TOP3BO95985 862 aaKnown RBP16.31■□□□□ 0.2
ACTN4-211ENST00000589528 TMEM191BP0C7N4 346 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 OPRD1P41143 372 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 MAPK8P45983 427 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 MRPS21P82921 87 aaKnown RBP16.31■□□□□ 0.2
ACTN4-211ENST00000589528 KIAA1211LQ6NV74 962 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 ARMCX6Q7L4S7 300 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 BRSK2Q8IWQ3 736 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 SYCP3Q8IZU3 236 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 TOP6BLQ8N6T0 577 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 WHAMMQ8TF30 809 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 ZCCHC14Q8WYQ9 949 aaKnown RBP16.31■□□□□ 0.2
ACTN4-211ENST00000589528 ACCSQ96QU6 501 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 IKZF4Q9H2S9 585 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 POLMQ9NP87 494 aaPredicted RBP16.31■□□□□ 0.2
ACTN4-211ENST00000589528 TRPM5Q9NZQ8 1165 aa16.31■□□□□ 0.2
ACTN4-211ENST00000589528 MAGEC2Q9UBF1 373 aaPredicted RBP16.31■□□□□ 0.2
ACTN4-211ENST00000589528 EVLQ9UI08 416 aaPredicted RBP16.31■□□□□ 0.2
ACTN4-211ENST00000589528 TNRC6BQ9UPQ9 1833 aaKnown RBP16.31■□□□□ 0.2
ACTN4-211ENST00000589528 PLXND1Q9Y4D7 1925 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 LEFTY2O00292 366 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 KLF8O95600 359 aaPredicted RBP16.3■□□□□ 0.2
ACTN4-211ENST00000589528 ABL1P00519 1130 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 APODP05090 189 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 TCF3P15923 654 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 ADSSP30520 456 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 TIE1P35590 1138 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms