RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 DNAJB1P25685 340 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 RPL9P32969 192 aaKnown RBP6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 STAT1P42224 750 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 AARSP49588 968 aaKnown RBP eCLIP6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 GPR15P49685 360 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 ZNF132P52740 706 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 CACNA2D1P54289 1103 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 GCNT1Q02742 428 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 TAP1Q03518 808 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 PTK2Q05397 1052 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 KLHL30Q0D2K2 578 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 C2CD6Q53TS8 623 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 FIGNQ5HY92 759 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 MDH1BQ5I0G3 518 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 LLGL2Q6P1M3 1020 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 DENND1BQ6P3S1 775 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 ZNF571Q7Z3V5 609 aaPredicted RBP6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 IRF2BP2Q7Z5L9 587 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 LRRTM3Q86VH5 581 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 LRRC8AQ8IWT6 810 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 FAM71AQ8IYT1 594 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 ACRBPQ8NEB7 543 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 APPL2Q8NEU8 664 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 UBA3Q8TBC4 463 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 FEZF2Q8TBJ5 459 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 RIN2Q8WYP3 895 aaPredicted RBP6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 TAF4BQ92750 862 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 IGSF21Q96ID5 467 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 UROC1Q96N76 676 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 PGLYRP2Q96PD5 576 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 DNAJC7Q99615 494 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 RAD9AQ99638 391 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 TMEM175Q9BSA9 504 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 PBX4Q9BYU1 374 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 SNX25Q9H3E2 840 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 VRTNQ9H8Y1 702 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 SEPT11Q9NVA2 429 aaKnown RBP6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 GDAP2Q9NXN4 497 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 DDX43Q9NXZ2 648 aaKnown RBP6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 TAS2R14Q9NYV8 317 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 IMPACTQ9P2X3 320 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 TJP2Q9UDY2 1190 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 CHORDC1Q9UHD1 332 aaPredicted RBP6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 NOCTQ9UK39 431 aaKnown RBP6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 BRCA2P51587 3418 aa6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 COL4A4P53420 1690 aaPredicted RBP6.42□□□□□ -1.38
CAPNS1-208ENST00000589162 ATG2AQ2TAZ0 1938 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 A0A087X0T9 212 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 A8MXQ7 604 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 TMEM189-UBE2V1I3L0A0 370 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 M0QZQ0 153 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 TULP2O00295 520 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 DDX3XO00571 662 aaKnown RBP eCLIP6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 ZNF263O14978 683 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 GRM6O15303 877 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 SOAT2O75908 522 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 FGF18O76093 207 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 MICAL2O94851 1124 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 GJB6O95452 261 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 ABL1P00519 1130 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 TPM1P09493 284 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 SPATA31D3P0C874 917 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 FAM228BP0C875 321 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 ODC1P11926 461 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 CYP11B1P15538 503 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 FERP16591 822 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 LAG3P18627 525 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 MX2P20592 715 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 FGFR3P22607 806 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 TBXAS1P24557 533 aaPredicted RBP6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 GNL1P36915 607 aaPredicted RBP6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 PNPLA4P41247 253 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 ALDH7A1P49419 539 aaKnown RBP6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 RGS19P49795 217 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 ERVFC1P60507 584 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 RELBQ01201 579 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 CYP27A1Q02318 531 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 GFPT1Q06210 699 aaPredicted RBP6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 TRIM14Q14142 442 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 GOLGA7BQ2TAP0 167 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 CTXN3Q4LDR2 81 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 SDHAF4Q5VUM1 108 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 OVOS1Q6IE37 1185 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 SPATA31D4Q6ZUB0 917 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 TOGARAM2Q6ZUX3 1019 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 LIMS2Q7Z4I7 341 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 VPS52Q8N1B4 723 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 TOP6BLQ8N6T0 577 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 OR8K1Q8NGG5 319 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 SLC30A5Q8TAD4 765 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 PHOSPHO2Q8TCD6 241 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 EPS8L1Q8TE68 723 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 GDPD5Q8WTR4 605 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 DDX1Q92499 740 aaKnown RBP6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 ZNF837Q96EG3 531 aaPredicted RBP6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 TMEM169Q96HH4 297 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 TMEM176AQ96HP8 235 aa6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 HEXIM2Q96MH2 286 aaKnown RBP6.41□□□□□ -1.38
CAPNS1-208ENST00000589162 TSPAN18Q96SJ8 248 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms