RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 OR6C75A6NL08 312 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 H7C4K7 107 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 FAM200BP0CF97 657 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 MAMLD1Q13495 774 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 C4orf50Q6ZRC1 276 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 PAQR9Q6ZVX9 377 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 DAAM2Q86T65 1068 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 ZDHHC17Q8IUH5 632 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 AAASQ9NRG9 546 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 STK39Q9UEW8 545 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 INSL6Q9Y581 213 aa32.76■■■□□ 2.84
CAPNS1-206ENST00000588815 NT5C1B-RDH14C9J2C7 533 aa32.75■■■□□ 2.83
CAPNS1-206ENST00000588815 DNAJC24Q6P3W2 148 aa32.75■■■□□ 2.83
CAPNS1-206ENST00000588815 ANKS3Q6ZW76 656 aa32.75■■■□□ 2.83
CAPNS1-206ENST00000588815 FAM35AQ86V20 835 aa32.75■■■□□ 2.83
CAPNS1-206ENST00000588815 RNF168Q8IYW5 571 aaPredicted RBP32.75■■■□□ 2.83
CAPNS1-206ENST00000588815 OR10T2Q8NGX3 314 aa32.75■■■□□ 2.83
CAPNS1-206ENST00000588815 SMARCD1Q96GM5 515 aa32.75■■■□□ 2.83
CAPNS1-206ENST00000588815 UBXN6Q9BZV1 441 aa32.75■■■□□ 2.83
CAPNS1-206ENST00000588815 ST7Q9NRC1 585 aa32.75■■■□□ 2.83
CAPNS1-206ENST00000588815 FAM170AA1A519 330 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 BUB1BO60566 1050 aaPredicted RBP32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 SYN1P17600 705 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 PPM1AP35813 382 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 EPHB4P54760 987 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 C2CD6Q53TS8 623 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 PAPD7Q5XG87 772 aaKnown RBP32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 PMF1Q6P1K2 205 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 XYLT1Q86Y38 959 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 MCRS1Q96EZ8 462 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 TTPALQ9BTX7 342 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 ZCWPW1Q9H0M4 648 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 MRPL42Q9Y6G3 142 aaKnown RBP32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 SLC4A7Q9Y6M7 1214 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 NFE2Q16621 373 aaPredicted RBP32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 USP41Q3LFD5 358 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 TMCO2Q7Z6W1 182 aaPredicted RBP32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 TMEM173Q86WV6 379 aaPredicted RBP32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 SLC39A11Q8N1S5 342 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 FEZF2Q8TBJ5 459 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 KCTD13Q8WZ19 329 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 DPF3Q92784 378 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 MYLPFQ96A32 169 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 ABCB6Q9NP58 842 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 ANAPC7Q9UJX3 599 aa32.74■■■□□ 2.83
CAPNS1-206ENST00000588815 SIGLEC16A6NMB1 481 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 MYO1FO00160 1098 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 ERBB2P04626 1255 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 PRLRP16471 622 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 PBX3P40426 434 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 SMARCB1Q12824 385 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 CTXN3Q4LDR2 81 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 MEI1Q5TIA1 1274 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 CLEC20AQ6ZU45 233 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 CEP57Q86XR8 500 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 COLGALT1Q8NBJ5 622 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 TMEM169Q96HH4 297 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 SELENOOQ9BVL4 669 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 KRT82Q9NSB4 513 aa32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 ZMYND8Q9ULU4 1186 aaPredicted RBP32.73■■■□□ 2.83
CAPNS1-206ENST00000588815 E5RJQ4 531 aa32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 SCNN1AP37088 669 aa32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 PPP1R15BQ5SWA1 713 aa32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 CYP4A22Q5TCH4 519 aa32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 PEX26Q7Z412 305 aa32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 BCL7CQ8WUZ0 217 aaPredicted RBP32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 FUBP3Q96I24 572 aaKnown RBP eCLIP32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 ZBED2Q9BTP6 218 aa32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 CSNK1G1Q9HCP0 422 aa32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 SPG21Q9NZD8 308 aa32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 AMFRQ9UKV5 643 aa32.72■■■□□ 2.83
CAPNS1-206ENST00000588815 CLDN5O00501 218 aa32.71■■■□□ 2.83
CAPNS1-206ENST00000588815 FIBCD1Q8N539 461 aa32.71■■■□□ 2.83
CAPNS1-206ENST00000588815 PNPLA8Q9NP80 782 aa32.71■■■□□ 2.83
CAPNS1-206ENST00000588815 CXXC1Q9P0U4 656 aaPredicted RBP32.71■■■□□ 2.83
CAPNS1-206ENST00000588815 AP1G2O75843 785 aa32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 URI1O94763 535 aaPredicted RBP32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 ATP1A1P05023 1023 aaKnown RBP32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 SLC1A1P43005 524 aa32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 DCUN1D2Q6PH85 259 aa32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 NT5DC3Q86UY8 548 aa32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 HERC6Q8IVU3 1022 aa32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 RAD9AQ99638 391 aa32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 CHST7Q9NS84 486 aa32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 CHORDC1Q9UHD1 332 aaPredicted RBP32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 PCDHB12Q9Y5F1 795 aa32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 NR2E3Q9Y5X4 410 aa32.7■■■□□ 2.83
CAPNS1-206ENST00000588815 TMEM191CA6NGB0 347 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 TULP2O00295 520 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 TBC1D4O60343 1298 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 SOD2P04179 222 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 KRT3P12035 628 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 CCDC142Q17RM4 750 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 CFAP221Q4G0U5 840 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 PIGZQ86VD9 579 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 LRRTM3Q86VH5 581 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 SPATA2LQ8IUW3 424 aaPredicted RBP32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 FNIP1Q8TF40 1166 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 TLR10Q9BXR5 811 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 IP6K2Q9UHH9 426 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms