RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, humanhuman

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-210ENST00000587429 KPNA1P52294 538 aaPredicted RBP23.09■■□□□ 1.29
PKN1-210ENST00000587429 CDH8P55286 799 aa23.09■■□□□ 1.29
PKN1-210ENST00000587429 CSTF1Q05048 431 aaKnown RBP23.09■■□□□ 1.29
PKN1-210ENST00000587429 MTAPQ13126 283 aa23.09■■□□□ 1.29
PKN1-210ENST00000587429 TXNDC11Q6PKC3 985 aa23.09■■□□□ 1.29
PKN1-210ENST00000587429 MON1AQ86VX9 555 aa23.09■■□□□ 1.29
PKN1-210ENST00000587429 RIN3Q8TB24 985 aa23.09■■□□□ 1.29
PKN1-210ENST00000587429 MYCBPAPQ8TBZ2 947 aa23.09■■□□□ 1.29
PKN1-210ENST00000587429 TMEM174Q8WUU8 243 aa23.09■■□□□ 1.29
PKN1-210ENST00000587429 TRMT2BQ96GJ1 504 aaKnown RBP23.09■■□□□ 1.29
PKN1-210ENST00000587429 SMYD3Q9H7B4 428 aa23.09■■□□□ 1.29
PKN1-210ENST00000587429 GKN1Q9NS71 199 aa23.09■■□□□ 1.29
PKN1-210ENST00000587429 FAM163BP0C2L3 166 aa23.08■■□□□ 1.29
PKN1-210ENST00000587429 PTPN1P18031 435 aaKnown RBP23.08■■□□□ 1.29
PKN1-210ENST00000587429 ATICP31939 592 aa23.08■■□□□ 1.29
PKN1-210ENST00000587429 GRIK1P39086 918 aa23.08■■□□□ 1.29
PKN1-210ENST00000587429 MAGEA9P43362 315 aa23.08■■□□□ 1.29
PKN1-210ENST00000587429 NCOA4Q13772 614 aa23.08■■□□□ 1.29
PKN1-210ENST00000587429 MAPRE1Q15691 268 aaKnown RBP23.08■■□□□ 1.29
PKN1-210ENST00000587429 WDR44Q5JSH3 913 aa23.08■■□□□ 1.29
PKN1-210ENST00000587429 CEP135Q66GS9 1140 aa23.08■■□□□ 1.29
PKN1-210ENST00000587429 SYAP1Q96A49 352 aaPredicted RBP23.08■■□□□ 1.29
PKN1-210ENST00000587429 SLC22A12Q96S37 553 aa23.08■■□□□ 1.29
PKN1-210ENST00000587429 CYP2S1Q96SQ9 504 aa23.08■■□□□ 1.29
PKN1-210ENST00000587429 OTOGLQ3ZCN5 2332 aa23.08■■□□□ 1.28
PKN1-210ENST00000587429 SPECC1L-ADORA2AF8WAN1 911 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 CHRNB1P11230 501 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 DDX6P26196 483 aaKnown RBP eCLIP23.07■■□□□ 1.28
PKN1-210ENST00000587429 RAP1GAPP47736 663 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 MLLT6P55198 1093 aaPredicted RBP23.07■■□□□ 1.28
PKN1-210ENST00000587429 USP46P62068 366 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 BECN1Q14457 450 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 C1orf220Q5T0J3 134 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 TSSK4Q6SA08 328 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 VSTM1Q6UX27 236 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 CCDC47Q96A33 483 aaKnown RBP23.07■■□□□ 1.28
PKN1-210ENST00000587429 C8orf33Q9H7E9 229 aaPredicted RBP23.07■■□□□ 1.28
PKN1-210ENST00000587429 TRPC7Q9HCX4 862 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 TDP1Q9NUW8 608 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 TMEM30AQ9NV96 361 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 UXTQ9UBK9 157 aaPredicted RBP23.07■■□□□ 1.28
PKN1-210ENST00000587429 ZMYM5Q9UJ78 669 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 TRAF3IP3Q9Y228 551 aa23.07■■□□□ 1.28
PKN1-210ENST00000587429 A8MXQ7 604 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 CALUO43852 315 aaPredicted RBP23.06■■□□□ 1.28
PKN1-210ENST00000587429 AP3M2P53677 418 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 CACNA2D1P54289 1103 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 ZNF699Q32M78 642 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 SCARA5Q6ZMJ2 495 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 TMC2Q8TDI7 906 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 SPATA17Q96L03 361 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 FAM83CQ9BQN1 747 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 B3GNT5Q9BYG0 378 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 SDCBP2Q9H190 292 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 CHRDQ9H2X0 955 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 VRTNQ9H8Y1 702 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 RBM12Q9NTZ6 932 aaKnown RBP23.06■■□□□ 1.28
PKN1-210ENST00000587429 THG1LQ9NWX6 298 aaKnown RBP23.06■■□□□ 1.28
PKN1-210ENST00000587429 FBXO4Q9UKT5 387 aa23.06■■□□□ 1.28
PKN1-210ENST00000587429 FRYLO94915 3013 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 C2orf78A6NCI8 922 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 F8VP50 259 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 CLDN5O00501 218 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 CLSTN1O94985 981 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 CTHP32929 405 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 PLCB2Q00722 1185 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 ZACNQ401N2 412 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 ZNF667Q5HYK9 610 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 TRIM68Q6AZZ1 485 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 ADSSL1Q8N142 457 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 ZNF518BQ9C0D4 1074 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 HPS4Q9NQG7 708 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 FRMD4BQ9Y2L6 1034 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 MYH10P35580 1976 aa23.05■■□□□ 1.28
PKN1-210ENST00000587429 OTOL1A6NHN0 477 aaPredicted RBP23.04■■□□□ 1.28
PKN1-210ENST00000587429 SOBPA7XYQ1 873 aa23.04■■□□□ 1.28
PKN1-210ENST00000587429 GAS6Q14393 721 aa23.04■■□□□ 1.28
PKN1-210ENST00000587429 KCNB1Q14721 858 aa23.04■■□□□ 1.28
PKN1-210ENST00000587429 PON2Q15165 354 aa23.04■■□□□ 1.28
PKN1-210ENST00000587429 ZNF528Q3MIS6 628 aa23.04■■□□□ 1.28
PKN1-210ENST00000587429 SV2AQ7L0J3 742 aa23.04■■□□□ 1.28
PKN1-210ENST00000587429 RALGPS2Q86X27 583 aaPredicted RBP23.04■■□□□ 1.28
PKN1-210ENST00000587429 SMYD4Q8IYR2 804 aaPredicted RBP23.04■■□□□ 1.28
PKN1-210ENST00000587429 ARL14EPQ8N8R7 260 aaPredicted RBP23.04■■□□□ 1.28
PKN1-210ENST00000587429 B3GALNT2Q8NCR0 500 aa23.04■■□□□ 1.28
PKN1-210ENST00000587429 EBF3Q9H4W6 596 aa23.04■■□□□ 1.28
PKN1-210ENST00000587429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.04■■□□□ 1.281e-6■■■■■ 74.4
PKN1-210ENST00000587429 GCNT4Q9P109 453 aa23.04■■□□□ 1.28
PKN1-210ENST00000587429 AKAP3O75969 853 aa23.03■■□□□ 1.28
PKN1-210ENST00000587429 LMNAP02545 664 aaKnown RBP23.03■■□□□ 1.28
PKN1-210ENST00000587429 ARSAP15289 507 aa23.03■■□□□ 1.28
PKN1-210ENST00000587429 NR2F2P24468 414 aa23.03■■□□□ 1.28
PKN1-210ENST00000587429 ANXA13P27216 316 aa23.03■■□□□ 1.28
PKN1-210ENST00000587429 PNOCQ13519 176 aa23.03■■□□□ 1.28
PKN1-210ENST00000587429 ITPRIPL2Q3MIP1 535 aa23.03■■□□□ 1.28
PKN1-210ENST00000587429 SPOPLQ6IQ16 392 aa23.03■■□□□ 1.28
PKN1-210ENST00000587429 ZC3H14Q6PJT7 736 aaKnown RBP23.03■■□□□ 1.28
PKN1-210ENST00000587429 DENND5BQ6ZUT9 1274 aa23.03■■□□□ 1.28
PKN1-210ENST00000587429 FMR1NBQ8N0W7 255 aaPredicted RBP23.03■■□□□ 1.28
PKN1-210ENST00000587429 GUF1Q8N442 669 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms