RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 NPTX2P47972 431 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 PXNP49023 591 aaPredicted RBP8.4□□□□□ -1.06
VMP1-204ENST00000587259 GUCY2FP51841 1108 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 PEX3P56589 373 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 LMNB2Q03252 620 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 RAD51AP2Q09MP3 1159 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 ADAM9Q13443 819 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 PPP2R5AQ15172 486 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 DCAF4L1Q3SXM0 396 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 SLC8B1Q6J4K2 584 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 PDXDC1Q6P996 788 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 ALKAL1Q6UXT8 129 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 PDZD4Q76G19 769 aaPredicted RBP8.4□□□□□ -1.06
VMP1-204ENST00000587259 USP37Q86T82 979 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 TMTC1Q8IUR5 882 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 SLC9A9Q8IVB4 645 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 MAP4K3Q8IVH8 894 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 DAW1Q8N136 415 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 TTC9BQ8N6N2 239 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 TC2NQ8N9U0 490 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 SHKBP1Q8TBC3 707 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 ZSCAN18Q8TBC5 510 aaPredicted RBP8.4□□□□□ -1.06
VMP1-204ENST00000587259 WNT2BQ93097 391 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 PCMTD1Q96MG8 357 aaPredicted RBP8.4□□□□□ -1.06
VMP1-204ENST00000587259 LRRC3BQ96PB8 259 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 TMEM209Q96SK2 561 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 ACO2Q99798 780 aaKnown RBP8.4□□□□□ -1.06
VMP1-204ENST00000587259 NDST4Q9H3R1 872 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 SMOC1Q9H4F8 434 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 SLITRK6Q9H5Y7 841 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 RXFP3Q9NSD7 469 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 ARMCX3Q9UH62 379 aaPredicted RBP8.4□□□□□ -1.06
VMP1-204ENST00000587259 GMEB2Q9UKD1 530 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 PYCARDQ9ULZ3 195 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 LUC7L2Q9Y383 392 aaKnown RBP8.4□□□□□ -1.06
VMP1-204ENST00000587259 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.4□□□□□ -1.06
VMP1-204ENST00000587259 CFAP47Q6ZTR5 3102 aa8.4□□□□□ -1.07
VMP1-204ENST00000587259 NPHP3-ACAD11A0A0J9YXS1 232 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 A0A1W2PRU2 124 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 GTPBP10A4D1E9 387 aaKnown RBP8.39□□□□□ -1.07
VMP1-204ENST00000587259 K7ENM7 598 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 K7ERI5 159 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 ARNTLO00327 626 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 ABLIM1O14639 778 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 PPEF2O14830 753 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 MAPK13O15264 365 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 SLC16A4O15374 487 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 NCAM2O15394 837 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 TEX33O43247 280 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 NR3C1P04150 777 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 GYPCP04921 128 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 CCDC175P0C221 793 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 CPB1P15086 417 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 PSMC3P17980 439 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 GRM5P41594 1212 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 ZBED6P86452 979 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 ENPEPQ07075 957 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 TNK2Q07912 1038 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 SIM2Q14190 667 aaPredicted RBP8.39□□□□□ -1.07
VMP1-204ENST00000587259 MRPL58Q14197 206 aaKnown RBP8.39□□□□□ -1.07
VMP1-204ENST00000587259 ARID5BQ14865 1188 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 SF3A2Q15428 464 aaKnown RBP8.39□□□□□ -1.07
VMP1-204ENST00000587259 ST3GAL2Q16842 350 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 C6orf132Q5T0Z8 1188 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 PKN3Q6P5Z2 889 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 ZNF720Q7Z2F6 126 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 TRIM59Q8IWR1 403 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 NELFCDQ8IXH7 590 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 C12orf56Q8IXR9 622 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 TCEAL8Q8IYN2 117 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 SYCP3Q8IZU3 236 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 CCAR2Q8N163 923 aaKnown RBP8.39□□□□□ -1.07
VMP1-204ENST00000587259 OR8K1Q8NGG5 319 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 SPIRE2Q8WWL2 714 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 DNASE1L2Q92874 299 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 SMARCD2Q92925 531 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 KCNN1Q92952 543 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 SECISBP2LQ93073 1101 aaKnown RBP8.39□□□□□ -1.07
VMP1-204ENST00000587259 HPS3Q969F9 1004 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 IFT74Q96LB3 600 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 UROC1Q96N76 676 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 ACCSQ96QU6 501 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 NELL2Q99435 816 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 RTKNQ9BST9 563 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 CCDC94Q9BW85 323 aaPredicted RBP8.39□□□□□ -1.07
VMP1-204ENST00000587259 SMG9Q9H0W8 520 aaKnown RBP8.39□□□□□ -1.07
VMP1-204ENST00000587259 PTPRHQ9HD43 1115 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 SEMA4GQ9NTN9 838 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 ABHD10Q9NUJ1 306 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 GTSE1Q9NYZ3 720 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 TBC1D7Q9P0N9 293 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 ANKFY1Q9P2R3 1169 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 CAPN11Q9UMQ6 739 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 TNFSF13BQ9Y275 285 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 FRMD4BQ9Y2L6 1034 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 SLC27A5Q9Y2P5 690 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 MRPS17Q9Y2R5 130 aaKnown RBP8.39□□□□□ -1.07
VMP1-204ENST00000587259 YIPF1Q9Y548 306 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 NUB1Q9Y5A7 615 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 PAXBP1Q9Y5B6 917 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms