RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 DDX47Q9H0S4 455 aaKnown RBP19.57■□□□□ 0.72
RETREG3-205ENST00000586870 CWH43Q9H720 699 aa19.57■□□□□ 0.72
RETREG3-205ENST00000586870 HCSTQ9UBK5 93 aa19.57■□□□□ 0.72
RETREG3-205ENST00000586870 PCDHGC3Q9UN70 934 aa19.57■□□□□ 0.72
RETREG3-205ENST00000586870 C2CD2Q9Y426 696 aa19.57■□□□□ 0.72
RETREG3-205ENST00000586870 CARNS1A5YM72 827 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 MYO1FO00160 1098 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 MEFVO15553 781 aaPredicted RBP19.56■□□□□ 0.72
RETREG3-205ENST00000586870 ALDH2P05091 517 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 WEE2P0C1S8 567 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 AFF1P51825 1210 aaKnown RBP19.56■□□□□ 0.72
RETREG3-205ENST00000586870 RWDD2BP57060 319 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 PTP4A2Q12974 167 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 TMEM132DQ14C87 1099 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 PLEKHA7Q6IQ23 1121 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 KCNT2Q6UVM3 1135 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 SND1Q7KZF4 910 aaKnown RBP eCLIP19.56■□□□□ 0.72
RETREG3-205ENST00000586870 PASD1Q8IV76 773 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 COLGALT1Q8NBJ5 622 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 TMEM35BQ8NCS4 154 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 CASKIN2Q8WXE0 1202 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 C11orf70Q9BRQ4 267 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 HPCAL4Q9UM19 191 aa19.56■□□□□ 0.72
RETREG3-205ENST00000586870 H3BNC9 293 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 P4HA1P13674 534 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 FOSL2P15408 326 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 CDH5P33151 784 aaPredicted RBP19.55■□□□□ 0.72
RETREG3-205ENST00000586870 MARCKSL1P49006 195 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 CARSP49589 748 aaKnown RBP19.55■□□□□ 0.72
RETREG3-205ENST00000586870 KRT17Q04695 432 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 CUL1Q13616 776 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 KLHL23Q8NBE8 558 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 CXorf38Q8TB03 319 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 GDPD5Q8WTR4 605 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 FAM124BQ9H5Z6 455 aaPredicted RBP19.55■□□□□ 0.72
RETREG3-205ENST00000586870 NRDE2Q9H7Z3 1164 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 CYP3A43Q9HB55 503 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.55■□□□□ 0.72
RETREG3-205ENST00000586870 NXF1Q9UBU9 619 aaKnown RBP19.55■□□□□ 0.72
RETREG3-205ENST00000586870 POLIQ9UNA4 740 aa19.55■□□□□ 0.72
RETREG3-205ENST00000586870 EPOPA6NHQ4 379 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 C5orf67F2Z3F1 127 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 MED7O43513 233 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 STAU1O95793 577 aaKnown RBP19.54■□□□□ 0.72
RETREG3-205ENST00000586870 ITGB3P05106 788 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 CALB1P05937 261 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 THP07101 528 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 PAEPP09466 180 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 MMP8P22894 467 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 PPM1AP35813 382 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 AARSP49588 968 aaKnown RBP eCLIP19.54■□□□□ 0.72
RETREG3-205ENST00000586870 BCAR1P56945 870 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 ZNF280BQ86YH2 543 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 GUCD1Q96NT3 240 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 PLEKHA5Q9HAU0 1116 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 MED4Q9NPJ6 270 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 PARVAQ9NVD7 372 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 MIOSQ9NXC5 875 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 LCMT1Q9UIC8 334 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 ITGA11Q9UKX5 1188 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 DERAQ9Y315 318 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 PTPRSQ13332 1948 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 PROSCO94903 275 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 BRD2P25440 801 aaKnown RBP19.54■□□□□ 0.72
RETREG3-205ENST00000586870 PBX3P40426 434 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 OR1G1P47890 313 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 FAM193AP78312 1265 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 RBP5P82980 135 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 GRIK3Q13003 919 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 MAMLD1Q13495 774 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 WDR72Q3MJ13 1102 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 SCARA5Q6ZMJ2 495 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 MMS22LQ6ZRQ5 1243 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 WHAMMQ8TF30 809 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 IFT81Q8WYA0 676 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 ALG13Q9NP73 1137 aaKnown RBP19.54■□□□□ 0.72
RETREG3-205ENST00000586870 SPG21Q9NZD8 308 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 FAN1Q9Y2M0 1017 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 CEP83Q9Y592 693 aa19.54■□□□□ 0.72
RETREG3-205ENST00000586870 FAM187AA6NFU0 413 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 NT5C1B-RDH14C9J2C7 533 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 INPPL1O15357 1258 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 DDHD2O94830 711 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 LINC00271P0C7V0 271 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 PYGMP11217 842 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 HSP90B2PQ58FF3 399 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 TTC39CQ8N584 583 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 FEZF2Q8TBJ5 459 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 TMEM175Q9BSA9 504 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 DPP3Q9NY33 737 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 DNAJB4Q9UDY4 337 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 AMACRQ9UHK6 382 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 NFU1Q9UMS0 254 aa19.53■□□□□ 0.72
RETREG3-205ENST00000586870 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.53■□□□□ 0.72
RETREG3-205ENST00000586870 LAMA2P24043 3122 aaKnown RBP19.52■□□□□ 0.72
RETREG3-205ENST00000586870 ZSCAN5CA6NGD5 496 aaPredicted RBP19.52■□□□□ 0.72
RETREG3-205ENST00000586870 H3BQF6 201 aa19.52■□□□□ 0.72
RETREG3-205ENST00000586870 PHF2O75151 1096 aa19.52■□□□□ 0.72
RETREG3-205ENST00000586870 FGF18O76093 207 aa19.52■□□□□ 0.72
RETREG3-205ENST00000586870 CSPG5O95196 566 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms