RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 SPATA17Q96L03 361 aa18.13■□□□□ 0.49
TRIM47-203ENST00000586495 FAM83CQ9BQN1 747 aa18.13■□□□□ 0.49
TRIM47-203ENST00000586495 TRPC7Q9HCX4 862 aa18.13■□□□□ 0.49
TRIM47-203ENST00000586495 CRTAC1Q9NQ79 661 aa18.13■□□□□ 0.49
TRIM47-203ENST00000586495 EHD2Q9NZN4 543 aa18.13■□□□□ 0.49
TRIM47-203ENST00000586495 DMDP11532 3685 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 DENND4CQ5VZ89 1909 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 TRIM66O15016 1216 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 KIF20AO95235 890 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 USP17L7P0C7H9 530 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 MYL6P60660 151 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 FAM160A1Q05DH4 1040 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 RUNX3Q13761 415 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 PON2Q15165 354 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 SLC9A9Q8IVB4 645 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 SYNPOQ8N3V7 929 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 MYCBPAPQ8TBZ2 947 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 CCDC47Q96A33 483 aaKnown RBP18.12■□□□□ 0.49
TRIM47-203ENST00000586495 MRPL45Q9BRJ2 306 aaKnown RBP18.12■□□□□ 0.49
TRIM47-203ENST00000586495 HPSEQ9Y251 543 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 CCL26Q9Y258 94 aa18.12■□□□□ 0.49
TRIM47-203ENST00000586495 ZNF638Q14966 1978 aaKnown RBP18.11■□□□□ 0.49
TRIM47-203ENST00000586495 VPS13AQ96RL7 3174 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 TRAV19A0A0A6YYK7 116 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 A8MXQ7 604 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 PDXKO00764 312 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 TADA3O75528 432 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 SYKP43405 635 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 PDE6CP51160 858 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 BIRC3Q13489 604 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 PDGFRLQ15198 375 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 MDH1BQ5I0G3 518 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 DENND5BQ6ZUT9 1274 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 KIAA0895Q8NCT3 520 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 PARD3BQ8TEW8 1205 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 TMEM174Q8WUU8 243 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 SECISBP2LQ93073 1101 aaKnown RBP18.11■□□□□ 0.49
TRIM47-203ENST00000586495 EXOC4Q96A65 974 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 PCED1BQ96HM7 432 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 EPC1Q9H2F5 836 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 RBM12Q9NTZ6 932 aaKnown RBP18.11■□□□□ 0.49
TRIM47-203ENST00000586495 DMAC2Q9NW81 257 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 NCDNQ9UBB6 729 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 NXF1Q9UBU9 619 aaKnown RBP18.11■□□□□ 0.49
TRIM47-203ENST00000586495 GTF3C3Q9Y5Q9 886 aa18.11■□□□□ 0.49
TRIM47-203ENST00000586495 CLSTN1O94985 981 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 CKMP06732 381 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 TDGF1P13385 188 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 PFKLP17858 780 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 PTPN1P18031 435 aaKnown RBP18.1■□□□□ 0.49
TRIM47-203ENST00000586495 ID4P47928 161 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 PPP3CCP48454 512 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 GAS6Q14393 721 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 KCNB1Q14721 858 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 KIAA2013Q8IYS2 634 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 SCAND2PQ9GZW5 306 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-203ENST00000586495 GZF1Q9H116 711 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-203ENST00000586495 KCTD10Q9H3F6 313 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 EBF3Q9H4W6 596 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 VRTNQ9H8Y1 702 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 HPS4Q9NQG7 708 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 TRPM5Q9NZQ8 1165 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 ZDHHC9Q9Y397 364 aa18.1■□□□□ 0.49
TRIM47-203ENST00000586495 LRRIQ3A6PVS8 624 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-203ENST00000586495 CALUO43852 315 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-203ENST00000586495 PAPSS2O95340 614 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-203ENST00000586495 RPN1P04843 607 aaKnown RBP18.09■□□□□ 0.49
TRIM47-203ENST00000586495 HDCP19113 662 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 CASP4P49662 377 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 CLDN10P78369 228 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 SATB1Q01826 763 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 GRSF1Q12849 480 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRIM47-203ENST00000586495 CCINQ13939 588 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 MTF1Q14872 753 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 ZNF699Q32M78 642 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 ZNF667Q5HYK9 610 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 TDRD10Q5VZ19 366 aaKnown RBP18.09■□□□□ 0.49
TRIM47-203ENST00000586495 TRIM68Q6AZZ1 485 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 ARL14EPQ8N8R7 260 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-203ENST00000586495 C8orf48Q96LL4 319 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 CYP2S1Q96SQ9 504 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 ELOVL4Q9GZR5 314 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 XYLT2Q9H1B5 865 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 RAB23Q9ULC3 237 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 SMG5Q9UPR3 1016 aaKnown RBP18.09■□□□□ 0.49
TRIM47-203ENST00000586495 FRMD4BQ9Y2L6 1034 aa18.09■□□□□ 0.49
TRIM47-203ENST00000586495 CFAP54Q96N23 3096 aa18.08■□□□□ 0.49
TRIM47-203ENST00000586495 EP300Q09472 2414 aaPredicted RBP18.08■□□□□ 0.49
TRIM47-203ENST00000586495 OBSL1O75147 1896 aa18.08■□□□□ 0.49
TRIM47-203ENST00000586495 FAM237AA0A1B0GTK4 181 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 F8VP50 259 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 TRDMT1O14717 391 aaKnown RBP18.08■□□□□ 0.48
TRIM47-203ENST00000586495 C4BPAP04003 597 aaKnown RBP18.08■□□□□ 0.48
TRIM47-203ENST00000586495 NR3C1P04150 777 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 P4HA1P13674 534 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 IFNAR2P48551 515 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 NCOA4Q13772 614 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 CPA6Q8N4T0 437 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 DCLK2Q8N568 766 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 GPR161Q8N6U8 529 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms