RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TMEM209Q96SK2 561 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 XYLT2Q9H1B5 865 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 RASAL2Q9UJF2 1139 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 H0YHG0 523 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 LCA5LO95447 670 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 SYF2O95926 243 aaKnown RBP10.81□□□□□ -0.68
RFFL-212ENST00000584655 USP17L7P0C7H9 530 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 BDNFP23560 247 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 SPARCL1Q14515 664 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 CA9Q16790 459 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 ZBED8Q8IZ13 594 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 C4orf33Q8N1A6 199 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 ISCUQ9H1K1 167 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 ACSS2Q9NR19 701 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 SLC27A5Q9Y2P5 690 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 CHD7Q9P2D1 2997 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 C9IYK1 514 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 KCNK1O00180 336 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 NDUFAB1O14561 156 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 MDM4O15151 490 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 SPATA31D3P0C874 917 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 RPL17P18621 184 aaKnown RBP10.81□□□□□ -0.68
RFFL-212ENST00000584655 COILP38432 576 aaPredicted RBP10.81□□□□□ -0.68
RFFL-212ENST00000584655 GJA9P57773 515 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 OTUD4Q01804 1114 aaKnown RBP10.81□□□□□ -0.68
RFFL-212ENST00000584655 MCL1Q07820 350 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 NFIL3Q16649 462 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 TTMPQ5BVD1 217 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 IZUMO3Q5VZ72 239 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 SLC27A1Q6PCB7 646 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 SPATA31D4Q6ZUB0 917 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 FAM47EQ6ZV65 393 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 MIB1Q86YT6 1006 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 APPL2Q8NEU8 664 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 FAM172AQ8WUF8 416 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 MRPL47Q9HD33 250 aaKnown RBP10.81□□□□□ -0.68
RFFL-212ENST00000584655 IGKV6D-21A0A0A0MT36 114 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 MYBPHLA2RUH7 354 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 GOLGA8KD6RF30 607 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 GOLGA8TH3BQL2 631 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 AGPSO00116 658 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 KRT15P19012 456 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 FBXO47Q5MNV8 452 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 TSHZ1Q6ZSZ6 1077 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 RHOT1Q8IXI2 618 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 RNF14Q9UBS8 474 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 TNFSF13BQ9Y275 285 aa10.81□□□□□ -0.68
RFFL-212ENST00000584655 BNIP3LO60238 219 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 P4HA1P13674 534 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 DARSP14868 501 aaKnown RBP10.8□□□□□ -0.68
RFFL-212ENST00000584655 PGGT1BP53609 377 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 GDF10P55107 478 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 YWHAGP61981 247 aaKnown RBP eCLIP10.8□□□□□ -0.68
RFFL-212ENST00000584655 DEFB115Q30KQ5 88 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 IQSEC1Q6DN90 963 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 ANKRD23Q86SG2 305 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 SIX6OS1Q8N1H7 587 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 MMGT1Q8N4V1 131 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 SLC7A14Q8TBB6 771 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 SPATA18Q8TC71 538 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 FAM136AQ96C01 138 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 DEFB118Q96PH6 123 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 ERP44Q9BS26 406 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 PLVAPQ9BX97 442 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 SENP6Q9GZR1 1112 aaPredicted RBP10.8□□□□□ -0.68
RFFL-212ENST00000584655 KIF9Q9HAQ2 790 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 DDX43Q9NXZ2 648 aaKnown RBP10.8□□□□□ -0.68
RFFL-212ENST00000584655 KPNA7A9QM74 516 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 ENDOD1O94919 500 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 APRTP07741 180 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 AKR1A1P14550 325 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 HFE2Q6ZVN8 426 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 CCDC110Q8TBZ0 833 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 ATXN3LQ9H3M9 355 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 PADI3Q9ULW8 664 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 COL2A1P02458 1487 aaPredicted RBP10.8□□□□□ -0.68
RFFL-212ENST00000584655 GAS8O95995 478 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 UNGP13051 313 aaPredicted RBP10.8□□□□□ -0.68
RFFL-212ENST00000584655 PECAM1P16284 738 aaPredicted RBP10.8□□□□□ -0.68
RFFL-212ENST00000584655 CYP3A5P20815 502 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 ACTN2P35609 894 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 CPT1AP50416 773 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 FCGRTP55899 365 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 MTFR1Q15390 333 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 ADGRF2Q8IZF7 708 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 ABI1Q8IZP0 508 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 PRM3Q9NNZ6 103 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 MTRF1LQ9UGC7 380 aaKnown RBP10.8□□□□□ -0.68
RFFL-212ENST00000584655 TSR3Q9UJK0 312 aaKnown RBP10.8□□□□□ -0.68
RFFL-212ENST00000584655 CHMP2BQ9UQN3 213 aa10.8□□□□□ -0.68
RFFL-212ENST00000584655 RGS16O15492 202 aaPredicted RBP10.79□□□□□ -0.68
RFFL-212ENST00000584655 PROSCO94903 275 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 ZNF865P0CJ78 1059 aaPredicted RBP10.79□□□□□ -0.68
RFFL-212ENST00000584655 RBP3P10745 1247 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 NCAM1P13591 858 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 AMPD1P23109 780 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 SDC4P31431 198 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 SP3Q02447 781 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 TTC30AQ86WT1 665 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 SCAMP5Q8TAC9 235 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms