RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 NSUN3Q9H649 340 aaKnown RBP12.35□□□□□ -0.43
CDRT1-207ENST00000583965 TLE6Q9H808 572 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 CSNK1G1Q9HCP0 422 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 ACP6Q9NPH0 428 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 ABI2Q9NYB9 513 aaPredicted RBP12.35□□□□□ -0.43
CDRT1-207ENST00000583965 ZKSCAN5Q9Y2L8 839 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 PCDHGC5Q9Y5F6 944 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 M0QYV0 167 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 CLDN5O00501 218 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 TRIM66O15016 1216 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 TGM5O43548 720 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 CLASP2O75122 1294 aaKnown RBP12.34□□□□□ -0.43
CDRT1-207ENST00000583965 AP1G2O75843 785 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 MICAL2O94851 1124 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 CSPG5O95196 566 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 LSM8O95777 96 aaKnown RBP12.34□□□□□ -0.43
CDRT1-207ENST00000583965 CALCAP01258 141 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 MMEP08473 750 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 HAPLN1P10915 354 aaPredicted RBP12.34□□□□□ -0.43
CDRT1-207ENST00000583965 SKILP12757 684 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 NPR3P17342 541 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 CHRNB2P17787 502 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 TNFAIP3P21580 790 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 BDNFP23560 247 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 ADORA2BP29275 332 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 CDH5P33151 784 aaPredicted RBP12.34□□□□□ -0.43
CDRT1-207ENST00000583965 FMO1Q01740 532 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 ADCY1Q08828 1119 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 GRIN2CQ14957 1233 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 CCDC142Q17RM4 750 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 PKDCCQ504Y2 493 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 TAF3Q5VWG9 929 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 PPP1R2P3Q6NXS1 205 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 CYP26C1Q6V0L0 522 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 CCDC149Q6ZUS6 474 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 ZNF571Q7Z3V5 609 aaPredicted RBP12.34□□□□□ -0.43
CDRT1-207ENST00000583965 PALB2Q86YC2 1186 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 TMTC1Q8IUR5 882 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 ATAD1Q8NBU5 361 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 CCDC112Q8NEF3 446 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 SLC22A17Q8WUG5 538 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 SLC20A1Q8WUM9 679 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 PGLYRP2Q96PD5 576 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 GAS2L1Q99501 681 aaPredicted RBP12.34□□□□□ -0.43
CDRT1-207ENST00000583965 DUSP16Q9BY84 665 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 UBXN6Q9BZV1 441 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 PNPLA8Q9NP80 782 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 DMAP1Q9NPF5 467 aaPredicted RBP12.34□□□□□ -0.43
CDRT1-207ENST00000583965 KRT82Q9NSB4 513 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 ARHGAP20Q9P2F6 1191 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 FBXW11Q9UKB1 542 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 BRWD1Q9NSI6 2320 aa12.34□□□□□ -0.43
CDRT1-207ENST00000583965 XPO1O14980 1071 aaKnown RBP12.33□□□□□ -0.44
CDRT1-207ENST00000583965 NRDCO43847 1150 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 VNN2O95498 520 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 CYP2F1P24903 491 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 RPL10AP62906 217 aaKnown RBP12.33□□□□□ -0.44
CDRT1-207ENST00000583965 DUSP4Q13115 394 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 PLD1Q13393 1074 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 MGAT5BQ3V5L5 792 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 CLEC20AQ6ZU45 233 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 ADGRD2Q7Z7M1 963 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 TTC30AQ86WT1 665 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 GPIHBP1Q8IV16 184 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 CCDC170Q8IYT3 715 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 TMEM35BQ8NCS4 154 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 KREMEN2Q8NCW0 462 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 STK32AQ8WU08 396 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 C8orf48Q96LL4 319 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 CCDC42Q96M95 316 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 NOX5Q96PH1 765 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 BAG1Q99933 345 aaPredicted RBP12.33□□□□□ -0.44
CDRT1-207ENST00000583965 KCNF1Q9H3M0 494 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 DEF6Q9H4E7 631 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 CYP4F11Q9HBI6 524 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 CYLDQ9NQC7 956 aa12.33□□□□□ -0.44
CDRT1-207ENST00000583965 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
CDRT1-207ENST00000583965 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDRT1-207ENST00000583965 NOTCH4Q99466 2003 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 PRRG1O14668 218 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 NCK2O43639 380 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 SEC24AO95486 1093 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 CYP1A1P04798 512 aaPredicted RBP12.32□□□□□ -0.44
CDRT1-207ENST00000583965 PLEKP08567 350 aaPredicted RBP12.32□□□□□ -0.44
CDRT1-207ENST00000583965 GZMAP12544 262 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 HOXA9P31269 272 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 EIF4A3P38919 411 aaKnown RBP12.32□□□□□ -0.44
CDRT1-207ENST00000583965 GRIK1P39086 918 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 GPD2P43304 727 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 PLA2G4AP47712 749 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 ALDH1A3P47895 512 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 NRIP1P48552 1158 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 MAP3K7CLP57077 242 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 SNX16P57768 344 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 NOMO3P69849 1222 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 PDE4CQ08493 712 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 LIN9Q5TKA1 542 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 DENND1BQ6P3S1 775 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 MSANTD4Q8NCY6 345 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms