RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 KRT5P13647 590 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
GGA3-217ENST00000583667 PAX3P23760 479 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 LRPAP1P30533 357 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 PNPLA4P41247 253 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 AMPD2Q01433 879 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 LMNB2Q03252 620 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 ITIH3Q06033 890 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 DMWDQ09019 674 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 INCA1Q0VD86 236 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 MYO1EQ12965 1108 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 LPIN1Q14693 890 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 PPM1JQ5JR12 505 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 ACAD10Q6JQN1 1059 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 PDE12Q6L8Q7 609 aaKnown RBP12.69□□□□□ -0.38
GGA3-217ENST00000583667 CES5AQ6NT32 575 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 TMEM270Q6UE05 265 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 LIMS2Q7Z4I7 341 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 SLFN11Q7Z7L1 901 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 RTN4RL1Q86UN2 441 aaPredicted RBP12.69□□□□□ -0.38
GGA3-217ENST00000583667 RHOT2Q8IXI1 618 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 TDRD5Q8NAT2 981 aaKnown RBP12.69□□□□□ -0.38
GGA3-217ENST00000583667 RBBP8NLQ8NC74 664 aaPredicted RBP12.69□□□□□ -0.38
GGA3-217ENST00000583667 ALS2CR12Q96Q35 445 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 PACSIN1Q9BY11 444 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 ZNF518BQ9C0D4 1074 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 NXF3Q9H4D5 531 aaKnown RBP12.69□□□□□ -0.38
GGA3-217ENST00000583667 AGO3Q9H9G7 860 aaKnown RBP12.69□□□□□ -0.38
GGA3-217ENST00000583667 UBN1Q9NPG3 1134 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 FAM105AQ9NUU6 356 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 NCDNQ9UBB6 729 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 CDC23Q9UJX2 597 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 FBXL21Q9UKT6 434 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 PCDHGC3Q9UN70 934 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 TFR2Q9UP52 801 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 AGAP1Q9UPQ3 857 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 PLXNA4Q9HCM2 1894 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 TTC3P53804 2025 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 ZZEF1O43149 2961 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 KIAA1671Q9BY89 1806 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 A0A0U1RQF3 1178 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 LSM8O95777 96 aaKnown RBP12.68□□□□□ -0.38
GGA3-217ENST00000583667 FTLP02792 175 aaPredicted RBP12.68□□□□□ -0.38
GGA3-217ENST00000583667 MMEP08473 750 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 WEE2P0C1S8 567 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 POLR2BP30876 1174 aaKnown RBP12.68□□□□□ -0.38
GGA3-217ENST00000583667 CDH5P33151 784 aaPredicted RBP12.68□□□□□ -0.38
GGA3-217ENST00000583667 TUBB4BP68371 445 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 GPC5P78333 572 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 FAM189BP81408 668 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 TDGQ13569 410 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 CLEC16AQ2KHT3 1053 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 WDR72Q3MJ13 1102 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 TWF2Q6IBS0 349 aaKnown RBP12.68□□□□□ -0.38
GGA3-217ENST00000583667 DPH6Q7L8W6 267 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 PALB2Q86YC2 1186 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 GPIHBP1Q8IV16 184 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 ZNF606Q8WXB4 792 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 LINC01599Q8WXQ3 324 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 CTNNBL1Q8WYA6 563 aaPredicted RBP12.68□□□□□ -0.38
GGA3-217ENST00000583667 RFFLQ8WZ73 363 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 PPP1R10Q96QC0 940 aaKnown RBP12.68□□□□□ -0.38
GGA3-217ENST00000583667 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 AVENQ9NQS1 362 aaPredicted RBP12.68□□□□□ -0.38
GGA3-217ENST00000583667 SLC38A7Q9NVC3 462 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 GDAP2Q9NXN4 497 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 USTQ9Y2C2 406 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 PCDHB12Q9Y5F1 795 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 MRFAP1Q9Y605 127 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 SPEGQ15772 3267 aa12.68□□□□□ -0.38
GGA3-217ENST00000583667 MACROD2A1Z1Q3 448 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 CTIFO43310 598 aaKnown RBP12.67□□□□□ -0.38
GGA3-217ENST00000583667 CILPO75339 1184 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 FGF18O76093 207 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 URI1O94763 535 aaPredicted RBP12.67□□□□□ -0.38
GGA3-217ENST00000583667 CYP1A2P05177 515 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 KRT19P08727 400 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 MYBL1P10243 752 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 ITGA4P13612 1032 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 TGM1P22735 817 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 GNA15P30679 374 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 MTHFRP42898 656 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 GATMP50440 423 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 CENPCQ03188 943 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 NFX1Q12986 1120 aaKnown RBP12.67□□□□□ -0.38
GGA3-217ENST00000583667 PAK2Q13177 524 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 C9orf57Q5W0N0 161 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 PHF13Q86YI8 300 aaPredicted RBP12.67□□□□□ -0.38
GGA3-217ENST00000583667 NPAS4Q8IUM7 802 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 C1orf210Q8IVY1 113 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 LRRC57Q8N9N7 239 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 TPCN2Q8NHX9 752 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 PGBD4Q96DM1 585 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 TRIM11Q96F44 468 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 LHX5Q9H2C1 402 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 ABCB6Q9NP58 842 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.67□□□□□ -0.38
GGA3-217ENST00000583667 GTF3C4Q9UKN8 822 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 DUSP12Q9UNI6 340 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 HES2Q9Y543 173 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms